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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr01g04386 ATGGATATACAACTCATGATCCCCTCTCCCTCAACCACCACCACCACCACCACCACACCCTACACCACCGCACCCTCCACCCCTAACCACTTCCCTAATTACTACTATAGTGCACCCACCAGCCCAATCCACACCACCTTTCACGATGACGACAACGACGAAGACGACGATTTTGCATTCGACTTCAGCGGACAACTAGAACCACCATCTATCTCCGCAGCCGACGAGCTCTTTCATTGTGGCCAAATCAAAACATCAAACACCTTTTTTAACAATATTATTCACCCAAACTCCACAACTTTTTATAAGAAAAAGTCACCTATTCAAAACTCACCCAAACGAGTACATGAAACCACCTCATGTACAATATCAGACATATTATCTAAAGAAGATAAGTTCGATACCAAAAGCCAAAAGCATTCTCTAACATGGTACAATAAATGGAACGTAAAAAACTTGCTACTGTTTCGAAGCACATCAGAAGGTAGTGCAAGAAGAACAAAAGACCAAGTGAATAGATACTCTAGAGTAACAAAAGGAGATGAAGATGTGAAGAACTCGAGCTTTAGAAGTACGGAGAGTTGTGGGTCGGGTAGGAGGGTGGTGAGGAAGGTGTCCGCGCATGAGATGCATTATACGGCGAACCGGGCCGTGTACGAGGAGATGAGGAGGAAGACATACTTGCCGTATAAGTCGGGGTTGTTAGGGTGTTTAGGGTTTAGGAACAATGTCGGTGCTGGTACTGTTCATGAGATTTCGAGAGGGGTTCGGTTCGGTTAA 780 45.0 MDIQLMIPSPSTTTTTTTTPYTTAPSTPNHFPNYYYSAPTSPIHTTFHDDDNDEDDDFAFDFSGQLEPPSISAADELFHCGQIKTSNTFFNNIIHPNSTTFYKKKSPIQNSPKRVHETTSCTISDILSKEDKFDTKSQKHSLTWYNKWNVKNLLLFRSTSEGSARRTKDQVNRYSRVTKGDEDVKNSSFRSTESCGSGRRVVRKVSAHEMHYTANRAVYEEMRRKTYLPYKSGLLGCLGFRNNVGAGTVHEISRGVRFG 259
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr01g04386 259 PANTHER OS07G0619500 PROTEIN 23 242 - -
Amtr01g04386 259 Pfam Protein of unknown function (DUF1645) 111 229 IPR012442 -
Amtr01g04386 259 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr01g04386 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
358187 Amtr01g04386 Amtr06g04410
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr1:118129121 Amtr06g04410 Amtr-Chr6:97728750 dispersed
Amtr Amtr-Chr1:118129121 Amtr02g02882 Amtr-Chr2:63686630 wgd