Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr01g04415 | ATGTTCAGTAACACCTCTGCAGGAACCGTTTCTTGGTTCAGAAACGATCAACAGACGAACCCCTCATCAAATCATCAAGGAATTGTTGTTATTTTCACATGGGGTTCTGTTCAATTAAAGGATTACGTTAATCTTTATTCCTCTTGTGGCTGGAATTCTCTCGCTGTTGTTTCTGATTTTCTTAATCCATTTTTTCCAGAGAGAGCCACATCACTTGCATTTTCCGTTCTCAATGAACTTTTAGAGGAATTGAGGGCTAGACCATGTCCTTTAGTCCTTGCAGCCTTTTCCGGTGGTTCACAAGCCTGTATGTATAAGGTTCTTCAGATCATTGAAAGGACATGTGAAGCACATCTTAATCTGGATGACAGTCGTTTAATCATGACCTGCATCTCTGGTCAAATGTATGACTCTGGTCCGGTCAATGTAACCAGTGATTTGGGTGCCCGGTTTGCCGTACAATCTTCCATTTTCAACGTTCCCGGTTCGTCAAAGTTGGCATCAATGGTTGCAAAAGGTGTCACTTCTGGTCTTGATGCTCTATTCCTTACTAGGTTTGGATCCCACCGCTCTGAATATTGGCAAACGCTGTACTCGTCAGTTGGTTTGGGTGCCCCATTTCTCATACTGTGTTCGGAAAATGACGATCTTGCCCCTTATCCGGTTATATGCTCATTTGCTCAACAAGTACAAGGATTAGGAGGACATGTTCGACTTATTGGATGGAAGGACTCTCCTCACGTAGGTCACTACATGCACAACCCCATCCAATATAGAGCAGCTGTAACCGAATTTCTTGACCACTCGGTTTCAATATTTAACCAAAAACTTCAAAAACTCGGGGAAAGAAACGGCATGGAAGGCATGCACGATAAAATATGTGAATTAATCTGTGACCTCCAAAAAGCAGCAGTTGATTCAAACCAAAGCCTGAGAAGAGTAGCAACCGGGCCAAACGACCACTTTTTCTTACCAAGTTCAGCCGAGTATCAAACCACTAAAGAATCGGGTTCATTACAAGATGAACAAAAAACAACGGTCCATTTAGCAAGCCCACCGGCCCTGAACCCACACAGTGTTCTTGGTCAAGTTCTGTTTGATGTGTGTGTACCTAAAAACATTGAAGGTTGGGATATTAAGTTTGAAAATAGAAAGCCGTTTGCCACCGCAGGTAAACAGTCGTCATCTTTGAAACGCATGAGACGATCAAGATTATGA | 1218 | 42.78 | MFSNTSAGTVSWFRNDQQTNPSSNHQGIVVIFTWGSVQLKDYVNLYSSCGWNSLAVVSDFLNPFFPERATSLAFSVLNELLEELRARPCPLVLAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTSDLGARFAVQSSIFNVPGSSKLASMVAKGVTSGLDALFLTRFGSHRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYMHNPIQYRAAVTEFLDHSVSIFNQKLQKLGERNGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVHLASPPALNPHSVLGQVLFDVCVPKNIEGWDIKFENRKPFATAGKQSSSLKRMRRSRL | 405 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr01g04415 | 405 | PANTHER | UNCHARACTERIZED | 18 | 274 | IPR008547 | - | |
| Amtr01g04415 | 405 | SUPERFAMILY | alpha-beta-Hydrolases | 65 | 268 | IPR029058 | - | |
| Amtr01g04415 | 405 | Gene3D | alpha-beta hydrolase | 126 | 280 | IPR029058 | - | |
| Amtr01g04415 | 405 | Pfam | Eukaryotic protein of unknown function (DUF829) | 131 | 377 | IPR008547 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr01g04415 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr1:118840848 | Amtr05g04210 | Amtr-Chr5:81052110 | dispersed |