AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr01g04415 ATGTTCAGTAACACCTCTGCAGGAACCGTTTCTTGGTTCAGAAACGATCAACAGACGAACCCCTCATCAAATCATCAAGGAATTGTTGTTATTTTCACATGGGGTTCTGTTCAATTAAAGGATTACGTTAATCTTTATTCCTCTTGTGGCTGGAATTCTCTCGCTGTTGTTTCTGATTTTCTTAATCCATTTTTTCCAGAGAGAGCCACATCACTTGCATTTTCCGTTCTCAATGAACTTTTAGAGGAATTGAGGGCTAGACCATGTCCTTTAGTCCTTGCAGCCTTTTCCGGTGGTTCACAAGCCTGTATGTATAAGGTTCTTCAGATCATTGAAAGGACATGTGAAGCACATCTTAATCTGGATGACAGTCGTTTAATCATGACCTGCATCTCTGGTCAAATGTATGACTCTGGTCCGGTCAATGTAACCAGTGATTTGGGTGCCCGGTTTGCCGTACAATCTTCCATTTTCAACGTTCCCGGTTCGTCAAAGTTGGCATCAATGGTTGCAAAAGGTGTCACTTCTGGTCTTGATGCTCTATTCCTTACTAGGTTTGGATCCCACCGCTCTGAATATTGGCAAACGCTGTACTCGTCAGTTGGTTTGGGTGCCCCATTTCTCATACTGTGTTCGGAAAATGACGATCTTGCCCCTTATCCGGTTATATGCTCATTTGCTCAACAAGTACAAGGATTAGGAGGACATGTTCGACTTATTGGATGGAAGGACTCTCCTCACGTAGGTCACTACATGCACAACCCCATCCAATATAGAGCAGCTGTAACCGAATTTCTTGACCACTCGGTTTCAATATTTAACCAAAAACTTCAAAAACTCGGGGAAAGAAACGGCATGGAAGGCATGCACGATAAAATATGTGAATTAATCTGTGACCTCCAAAAAGCAGCAGTTGATTCAAACCAAAGCCTGAGAAGAGTAGCAACCGGGCCAAACGACCACTTTTTCTTACCAAGTTCAGCCGAGTATCAAACCACTAAAGAATCGGGTTCATTACAAGATGAACAAAAAACAACGGTCCATTTAGCAAGCCCACCGGCCCTGAACCCACACAGTGTTCTTGGTCAAGTTCTGTTTGATGTGTGTGTACCTAAAAACATTGAAGGTTGGGATATTAAGTTTGAAAATAGAAAGCCGTTTGCCACCGCAGGTAAACAGTCGTCATCTTTGAAACGCATGAGACGATCAAGATTATGA 1218 42.78 MFSNTSAGTVSWFRNDQQTNPSSNHQGIVVIFTWGSVQLKDYVNLYSSCGWNSLAVVSDFLNPFFPERATSLAFSVLNELLEELRARPCPLVLAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTSDLGARFAVQSSIFNVPGSSKLASMVAKGVTSGLDALFLTRFGSHRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYMHNPIQYRAAVTEFLDHSVSIFNQKLQKLGERNGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVHLASPPALNPHSVLGQVLFDVCVPKNIEGWDIKFENRKPFATAGKQSSSLKRMRRSRL 405
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr01g04415 405 PANTHER UNCHARACTERIZED 18 274 IPR008547 -
Amtr01g04415 405 SUPERFAMILY alpha-beta-Hydrolases 65 268 IPR029058 -
Amtr01g04415 405 Gene3D alpha-beta hydrolase 126 280 IPR029058 -
Amtr01g04415 405 Pfam Eukaryotic protein of unknown function (DUF829) 131 377 IPR008547 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr01g04415 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr1:118840848 Amtr05g04210 Amtr-Chr5:81052110 dispersed