Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr02g04111	ATGGCTGATGAGAAGGAGGTAAAGGAAGTGGTTGTTGAGGAGAATAAGAAGGATGATGATGACGTGGATAAGAAGAAAATGAAGAAGAAGAAGGGGGTTTTGTCTCGGATTTGGAACGCAGTGTTTGGATTACGTGGTGATGATTTTGAGAAGAGGTTGCAGTATATATCTAAAGAAGAAGCTATTCTTGTTTCTAGGATCAAGAGGAGATCTTTGCGATGGAGATCAACGGCCAGGAATTTAGTTCTTTTTTCTCTTATTTTTGAGTTGGTTGCGGTGGGTTATGCTATAATGACGACAAGAACAGTAGACATGGATTGGAGAACGAGATCATTGCACGTCTTACCCATGTTTCTTTTGCCTGCATTATCGTTCGGTTTGTATTATGGACTTTCAAGATTTACCAAGTATTGTGATCAAAGGGATCAGAAAACATTAGAGAGGCTTCTGAACGAAAGGCAAACGAAAATTGATGAGCTTAAAGAGAGAACTAATTACTACATCACTCAGCAACTCATTCAGAAATACGATCCGGATCCAGCAGCAAAAGCAGCTGCCGCATCTGTTCTTGCATCAAAATTGGGTGCAGATTCGGGCCTGAAAGTATTTCTTGGAAACGAATCGCAACCAAATACACATGACACAGGGAAAAGCAGTGACGTTGAGCTTCAACAATCAAGTGGTCTCAGGAAACGAAATCAATCAAACCTTAAATCTTCTGAAAGCAATGCGAGGGAACAATTTGATAAAGAAACGCCTCAGTTAAGCGAAAACGATGTTTCTGGGAATTTAGCGCATAATCACGTTGTTGTTGAGCATCATAACCCTGCAGATACAGGCGCTCAAGATGGCGGTTGGATTGCTAAAATTGCTGCATTGCTTGTGGGAGAGGATCCCACAGAATCTTATGCACTTATATGTGGAAATTGCCATACGCATAATGGTCTTGCAAGAAAAGAGGATTACCCGTTCATCACTTACTATTGTCCGCATTGTCACGCCTTAAATAAACCAAAGAATTCGGCACTTCCTTCAGAAACGATAGCAAGTGCGGATGTTAATTTGACCGAAGATGATAATGAGTCAACGGGTGAGAAAGTATCTAGTGCTAGCAGTAGCGCGGTAGCTACATTGGAAGAGAAAGAAGCAACTGAGAAAACAGTGGCTGCATAG	1173	41.43	MADEKEVKEVVVEENKKDDDDVDKKKMKKKKGVLSRIWNAVFGLRGDDFEKRLQYISKEEAILVSRIKRRSLRWRSTARNLVLFSLIFELVAVGYAIMTTRTVDMDWRTRSLHVLPMFLLPALSFGLYYGLSRFTKYCDQRDQKTLERLLNERQTKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLGNESQPNTHDTGKSSDVELQQSSGLRKRNQSNLKSSESNAREQFDKETPQLSENDVSGNLAHNHVVVEHHNPADTGAQDGGWIAKIAALLVGEDPTESYALICGNCHTHNGLARKEDYPFITYYCPHCHALNKPKNSALPSETIASADVNLTEDDNESTGEKVSSASSSAVATLEEKEATEKTVAA	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr02g04111	390	MobiDBLite	consensus disorder prediction	205	260	-	-
	Amtr02g04111	390	MobiDBLite	consensus disorder prediction	1	26	-	-
	Amtr02g04111	390	Coils	Coil	143	163	-	-
	Amtr02g04111	390	PANTHER	ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK	26	372	IPR040115	GO:0071782(PANTHER)\|GO:0071786(PANTHER)\|GO:0071786(InterPro)
	Amtr02g04111	390	MobiDBLite	consensus disorder prediction	354	390	-	-
	Amtr02g04111	390	MobiDBLite	consensus disorder prediction	205	242	-	-
	Amtr02g04111	390	Pfam	Predicted integral membrane zinc-ribbon metal-binding protein	286	336	IPR019273	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr02g04111	K23292	endoplasmic reticulum junction formation protein lunapark

Event-related genes

Select	Gene_1	Gene_2	Event_name
	11061	Amtr02g02567	Amtr02g04111
	11282	Amtr02g04111	Amtr02g07915
	11283	Amtr02g04111	Amtr07g01275
	359028	Amtr02g04111	Amtr02g06912

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr2:58427492	Amtr02g04111	Amtr-Chr2:81760514	wgd
	Amtr	Amtr-Chr2:81760514	Amtr02g06912	Amtr-Chr2:125889841	wgd
	Amtr	Amtr-Chr2:81760514	Amtr02g07915	Amtr-Chr2:147073911	wgd
	Amtr	Amtr-Chr2:81760514	Amtr07g01275	Amtr-Chr7:17736123	wgd