Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g04118 | ATGCACTGTCTACCTATACAATCCCTCACCCCTCACCCCAAAACCCACTTAAAATCCCAAACCCATGTCCTCAAATTCTTACCAACACCTCAATCCATTCACCTTAATAATAATAATAATAATAAACACTGCAAAAATATTATTAATAGGAGTAATGGCTACAGTTATACTTGTTGTTTGAAGGCTGATGTGGGTTTAAGTTGTAATGAGGAGGAGTTTGATATGGAATTGGGGCGTATGTTGAGGCTGTTGCCTGAGGAGATGAGGAGGAGGGTTAATGAGCATGAGGAATTGCATCAGTTGATTGAGGTTGTTATGGATTTGGGCCGGAAGCCGCTCGCGCGGTTTCCGTCTGGGGATTTTGTGTTGTCTGATGATTTGATCACTGTTGATGATCTTGAACATGCTACTTCTTTGGTAGGTGATTTCGCTATTGATAATCGAGCTGGCATCAGCAGAACCTTACATCGAATAAGTGCCATCAGAAACAGGAAAGGCACAATAATTGGGCTAACATGTCGTGTTGGCCGAGCTGTATCAGGAAGTGCCAAGTTATTGCAAGATTTGGTTAAAGATGGATCTTCTTTGTTGCTTATTGGACCACCAGGAGTAGGAAAAACTACAATTATCAGGGATGTAGCTCGAATGCTTGCAAATGATTATAATAAACGTGTAATGATTGTTGATACTTCAAATGAAATTGGTGGAGACGGTGATATACCACATTCGGGTATAGGCAATGCTCGACGGATGCAAGTTCCTGATGCCGACATGCAACATAAGGTATTAATAGAAGCAGTTGAAAATCATATGCCCCAAGTGATTGTAATTGATGAAATTGGTACAAAGCTTGAGGCAGCAGCTGCTAGCACCATAGCACAACGTGGAATTCAGTTAGTTGCAACTGCTCATGGTATCACAATTGAGAATTTAGTACAGAATCCTTCATTGGATATGCTTGTTGGAGGAATACAGAGTGTGACACTAGGAGATGAAGAGGCAAACCGAAGGGGTGTACAGAAATCAGTATTGGAGAGAAAAGGTCCTTCCACTTTTGATTGTGCCGTTGAGATTATTTCTAGGCTCGAGTTGAGAGTTCACAGCAGTCTGGAAGCAACCGTTGATGCAATTCTTTCTGGCCGTTCTCCGAACTATCAAGTTTGCAAGTTAAATCAGGGAGAGATAGATCTTGCATTACAAAGTGATCCAATTACATACGAATCATTTGTCAAGAAGAGTGTCTCTACAGTTGAAGGCATTCCACAGTGGACCAACGAAAAGCTTACACCTGACAAACAAATTTCTAAAGAGTCTCAAATTGATACAGATAATTCTTATGATAAGCCGTCCTTGTGTTTATTTCTCTATGGCGTCTCGGAGACAAGTACAAGACAAGTATTCAAACACTTAAAGATGGAATCCGCTGTTGAGTTTAGTGAGAATATTAGTGAAGCAGATGCAATACTTGCATTATTGTCTAAAATCAAGAAAAATTCTCGGATTCAGGCCGCTGCCCACTCTAACGACATACCAATTTATGTCACGAAGACAAGCTCATTGACACAGTTAACAAAGGCCATAGAGGCATTAGTGACTGATTATGATAATGGTTTTGAAGATATTGAAGATGAATATTCCCAGATAAATGAATCAGAGAAGACTGATGCTTTGGAGGAAGTGAGGATTGCAATTGAACAGGTTGTAATCCCAAAAGGTGAACCTGTAGAATTACTTCCAAGGCAACCAAACATTATGTTGCTTCAAAAGGATCTAATTCGTAAATATAAGCTGCAAGCACAGCGTGTCGGTTCAGAGGTGGATGGAAGGCTTCGTATTCTACCATTTCAAGCTGAAAAACAAGATAAAAATGATGTCGAAGATGATGACCATGATGATGATGAAGACAATGATGGTGATGATACTGAACTTAATGAGCTGTCTAACGTGAATGGCTCGCCCTATGCGGTGAACAGATTGCCTTTTCTGCCTGACTAG | 1995 | 40.45 | MHCLPIQSLTPHPKTHLKSQTHVLKFLPTPQSIHLNNNNNNKHCKNIINRSNGYSYTCCLKADVGLSCNEEEFDMELGRMLRLLPEEMRRRVNEHEELHQLIEVVMDLGRKPLARFPSGDFVLSDDLITVDDLEHATSLVGDFAIDNRAGISRTLHRISAIRNRKGTIIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDVARMLANDYNKRVMIVDTSNEIGGDGDIPHSGIGNARRMQVPDADMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVQNPSLDMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRLELRVHSSLEATVDAILSGRSPNYQVCKLNQGEIDLALQSDPITYESFVKKSVSTVEGIPQWTNEKLTPDKQISKESQIDTDNSYDKPSLCLFLYGVSETSTRQVFKHLKMESAVEFSENISEADAILALLSKIKKNSRIQAAAHSNDIPIYVTKTSSLTQLTKAIEALVTDYDNGFEDIEDEYSQINESEKTDALEEVRIAIEQVVIPKGEPVELLPRQPNIMLLQKDLIRKYKLQAQRVGSEVDGRLRILPFQAEKQDKNDVEDDDHDDDEDNDGDDTELNELSNVNGSPYAVNRLPFLPD | 664 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g04118 | 664 | CDD | AAA | 193 | 282 | - | - | |
| Amtr02g04118 | 664 | Gene3D | - | 169 | 375 | IPR027417 | - | |
| Amtr02g04118 | 664 | FunFam | uncharacterized protein ycf45 isoform X2 | 157 | 374 | - | - | |
| Amtr02g04118 | 664 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 77 | 336 | IPR027417 | - | |
| Amtr02g04118 | 664 | PANTHER | KINASE-RELATED | 38 | 577 | - | GO:0009507(PANTHER) | |
| Amtr02g04118 | 664 | MobiDBLite | consensus disorder prediction | 625 | 642 | - | - | |
| Amtr02g04118 | 664 | CDD | R3H-AAA | 555 | 614 | IPR034081 | - | |
| Amtr02g04118 | 664 | SMART | AAA-5 | 192 | 323 | IPR003593 | GO:0016887(InterPro) | |
| Amtr02g04118 | 664 | MobiDBLite | consensus disorder prediction | 617 | 664 | - | - | |
| Amtr02g04118 | 664 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 200 | 219 | - | - | |
| Amtr02g04118 | 664 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 559 | 577 | - | - | |
| Amtr02g04118 | 664 | Pfam | Sporulation stage III, protein AA | 168 | 322 | IPR045735 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g04118 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:81852408 | Amtr03g06699 | Amtr-Chr3:143419920 | dispersed |