AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g04170 ATGCGAGCTAAAAACAGAAACAAAAGTGCAGTAGTTTTGCCCCATAAAGCCCCGGCTGACCATATTATTCGACTGCCAAATTCGTATGAAGGTGAAAGTCTCCTTCATCTTCTCAACTCAATTCAGAGAGAAATTAAGTCAGCCAGACTTGCAGATCAATCTTTACCTCATAAAATTTGGCTTAAGCAACAATTTTCAATTGGTGTCAACGATGTGACCCGTGTGCTTGAACGAATGCCAGCGGTTCATGGATCTATTAGCTCTTCCCCGCAAAACACCACTTACTCTAGTCGTAATGCGAAACAGCCTCCTCTCCGACTGCAGGCCATACTTATAGCAACAGACTGCAATCCTCGAGGGCTTACAAAACACCTGCCGATCCTGGCCTCGTCCAGGGAAGTGCCCGTTATCTTCGTGAAAGATAAGACGGGTGGATCGTTTAAATTGGGTGAAATTGTGAACTTGAAGACAGCTATGGCAATTGGAGTTAAAGCTAGAGGAAATTCAATCAACAAGATGATAGGCGAGATTCTTGGAGGTAACGATTGTGTGCCCGTCAATGATGTGTGTGAATGA 576 44.27 MRAKNRNKSAVVLPHKAPADHIIRLPNSYEGESLLHLLNSIQREIKSARLADQSLPHKIWLKQQFSIGVNDVTRVLERMPAVHGSISSSPQNTTYSSRNAKQPPLRLQAILIATDCNPRGLTKHLPILASSREVPVIFVKDKTGGSFKLGEIVNLKTAMAIGVKARGNSINKMIGEILGGNDCVPVNDVCE 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g04170 191 Gene3D - 40 178 IPR029064 -
Amtr02g04170 191 SUPERFAMILY L30e-like 54 177 IPR029064 -
Amtr02g04170 191 PANTHER OS07G0636400 PROTEIN 1 183 - -
Amtr02g04170 191 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 108 169 IPR004038 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g04170 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
197494 Amtr Amtr02g04170 Amtr-Chr2:82646150 Amtr05g01748 Amtr-Chr5:31326242