Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g04181 | ATGGCATCCATGACTACCACCTTCACCTCATCTTTCTCCAACAAAACATGTTTTTTGGATCAATCATCCTTCCATGGTGTTCCCATCACTTCCCCGGTCCGGATCCAACCCGTTAAATCGAACCAAAGCAAGAACATGCCCATCACCATGTCTTACGACCTCGGTTCATTCACCTTTCAACCCATCAAGGAGGCGATCGTGTCCCGTGAAATGACCAGGAGGTACATGACTGACATGATCACCTATGCCGATACCGACGTTGTTGTCGTTGGTGCTGGCTCTGCTGGTCTCTCATGTGCTTACGAGCTTAGCAAAAATCCTAACGTTCAGGTAGCTATCATCGAGCAATCTGTGAGCCCTGGAGGAGGAGCATGGCTCGGAGGACAGCTGTTTTCAGCCATGGTGGTCCGCAAACCCGCACACCACTTCCTGGACGAGCTCGAGATCGAGTACGATGAGCAAGAAGACTACGTGGTCATCAAACACGCCGCTCTCTTCACATCCACCATCATGAGCAAGCTTTTGGCCAGACCAAACGTGAAGCTCTTCAACGCGGTTGCAGCCGAGGATTTGATCATAAAGGAAGGGAGAGTAGGTGGTGTTGTGACCAACTGGGCTTTGGTGTCCATGAACCATGACACGCAGTCATGCATGGACCCTAATGTGATGGAGGCTAAGGTGGTTGTGAGCTCATGTGGTCATGATGGTCCCATGGGTGCTACGGGGGTCAAGCGGCTCAGGAGCGTTGGAATGATCGAAAGCGTTCCTGGGATGAAGGCGCTCGACATGAACACTGCTGAGGACGCCATCGTGAAGCTTACCAGAGAGATTGTCCCTGGTATGATTGTTACTGGAATGGAAGTTGCTGAGATTGATGGATCTCCCAGAATGGGACCAACATTTGGAGCTATGATGATATCCGGACAGAAAGCGGCTCATTTGGCATTGAAGGCACTTGGGCTGCCGAATGCATTGGACGGAACAAGTGTGGGAAGTGTTCACCCTGAGCTGATCCTTGCAGCTGCTGATTCTAGTGAGACCGCCGATGCCTAA | 1053 | 51.38 | MASMTTTFTSSFSNKTCFLDQSSFHGVPITSPVRIQPVKSNQSKNMPITMSYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTSVGSVHPELILAAADSSETADA | 350 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g04181 | 350 | Gene3D | - | 84 | 329 | IPR036188 | - | |
| Amtr02g04181 | 350 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 13 | 349 | - | - | |
| Amtr02g04181 | 350 | FunFam | Thiamine thiazole synthase, chloroplastic | 84 | 319 | - | - | |
| Amtr02g04181 | 350 | Gene3D | - | 53 | 83 | - | - | |
| Amtr02g04181 | 350 | SUPERFAMILY | FAD-NAD(P)-binding domain | 48 | 312 | IPR036188 | - | |
| Amtr02g04181 | 350 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 5 | 328 | IPR027495 | GO:0009228(InterPro) | |
| Amtr02g04181 | 350 | Pfam | Thi4 family | 68 | 301 | - | - | |
| Amtr02g04181 | 350 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 64 | 319 | IPR002922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g04181 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 359047 | Amtr02g04181 | Amtr02g06651 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 298056 | Amtr | Amtr02g04181 | Amtr-Chr2:82798534 | Amtr02g06651 | Amtr-Chr2:120130141 |