AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g04188 ATGGGCTGCAGAAATCTAAGTGACAAAGCAGCAGAAGAAAGATCAGCAGCACCAATAGCATCATCTGGTATTATTGTAAATGATGCATTGCTGCTAACAACCATGTGTCTCATTGGCCTCTCTGTTGATGTGCATATTAAGGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTCTGTCAACCACCCTTATGCTATTGTGTTGAAACAGGCAAAGATGACGAAGAAAGGGAGTTGTAATTCAAATGTGGCCAATGAAGAGGTGATTGGGACACTTATAATTCAGTCAGATGATCTTGTTCAAGTGGTTGCAAAGAAAGTAAGGATTCCCGCAGATGGTTTTGCTGGACATGGAACTGGAGATGAAACAGGGGCTGTTGCATGCTCCCTTCCTTCTAATGGATTTCCATTGACAGAATCAAATAAATCAATGACTAGCAAGTCAAATGTTGGTCAACCATATGCTAATCAAACAAGACGCTCGTCCGGAACTGAAAATGGGTTTGCCAATGGATATAGACCCGAAAATACTATTCACTCAACCAATGCTCTTCAAGTAAAAGATACAGATGTGAAAGATTCAATAAAGAAGGAAGAATGTTTGAAGGATGCAGATGATAACAGAAAGAACGGTAATCACACTAGCTCATCATCAACTCCAAGTGAAACCATCATCACTCCAAGTGAAATCTCAAATTCTAATCAAACTACCAAGGAGTTTAAACTCAACCCTGGAGCGAAGATATTTTCTCCATCCTTTCCAACTAAAAGATCACCAACCCCACAAGCAATGGTTGCGGGTGCAAATCTTGTATACAATCCCACCGACAGTCATCCTAGCGTCCCAGTTGTCTTGCCACAGCCCGAAGTTGAAGTCACCCCGTTTGCTCCCCGTTCAGTGCCTGTTAAGTTTGTTCCGTATGATGTACAACATCATCCTCCTATTGTTGGATATATGTCAAACAGGAGTCAACCCGTTAGATACGGGGCGTATCATCCGGTCCAAACAGCACCTACCTATGTCCAACCTAATTCTCAGAATGTAATGGTTGGACGATTGGGACCTGTCGTCTACGTTCATCCAGTTTCTCAAGAGATGGTCCCTAGCTTCTCCACTGTTTTAACTCCACACCAGCTTCATGTCCCTAAACACCAAGGTGCCCAAGCAATGCAAATATGTGCAGCTCCACCGTTTGTAGGTGGCGGCGGTCAGACACCATATGTTTTGCCAAGCCATGTTCCCATATCGCAGCTGCCTTACCCAATCTCAATCCCGGGATCTAATGGCTTTTTAGTATCAAAGTTTTCTTGA 1314 43.38 MGCRNLSDKAAEERSAAPIASSGIIVNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTASVNHPYAIVLKQAKMTKKGSCNSNVANEEVIGTLIIQSDDLVQVVAKKVRIPADGFAGHGTGDETGAVACSLPSNGFPLTESNKSMTSKSNVGQPYANQTRRSSGTENGFANGYRPENTIHSTNALQVKDTDVKDSIKKEECLKDADDNRKNGNHTSSSSTPSETIITPSEISNSNQTTKEFKLNPGAKIFSPSFPTKRSPTPQAMVAGANLVYNPTDSHPSVPVVLPQPEVEVTPFAPRSVPVKFVPYDVQHHPPIVGYMSNRSQPVRYGAYHPVQTAPTYVQPNSQNVMVGRLGPVVYVHPVSQEMVPSFSTVLTPHQLHVPKHQGAQAMQICAAPPFVGGGGQTPYVLPSHVPISQLPYPISIPGSNGFLVSKFS 437
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g04188 437 MobiDBLite consensus disorder prediction 203 246 - -
Amtr02g04188 437 MobiDBLite consensus disorder prediction 212 242 - -
Amtr02g04188 437 MobiDBLite consensus disorder prediction 139 186 - -
Amtr02g04188 437 PANTHER ATAXIN 2-RELATED 156 404 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Amtr02g04188 437 Pfam Ataxin 2 SM domain 27 106 IPR025852 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g04188 - -