AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06502 ATGCTGGATAAACCATTGGAACAAGAACCTATGCTCGCAGCAAGAGTCACAATTGAAGACGGCATTTGTCTTCTTCTAGATGTTGATGATATTGACCGTTTTCTACAGTTTAATCAGCTCCAGGATGGTGGGGCCCAATTACGGCAGAGGCGGCAAGTCCTTCTAGAAGGTTTAGCAACATCGCTTCAACTTGTTGACCCATTAGGCCAGAACGGTCAAACGGCCGAGTCAGCTTCAAAGGATGATTTCATCTTTTTACGGTTGGTTTCCCTTTCAAAGGGACGGAAACTTCTCGCGAGTTACCTCAAACATCTTGACCCTGGAAGCGAGTTGACTCGTGTAGTTTGTATGGCAATTTTCCGCCATTTAAGGTTTTTATTCGGAGTGCTTGCAGTTGATCCACAAGCAGCAGAAACTATTAACACTCTTATAGTTACCGTTTCTTCTTCAGTTTGCGGGATGGAGCTTAGATCACTTGGTTCCTGTCTTGCATCTGTTGTTTGTTCGCCAGAGCACCCCCCACTTCGTCCTGTTGGTAGTCCCGCTGGGGATGGGGCCTCTGTTGTGATAAAATCTGTCCTTGAAAGAGCAACTGAGCTTTTAACTGACCCAAATGCTAGCACGAACTGCAGCCCAGCAAATCGGGCTTTTTGGCAGGCATCTTTTGATGCTTTTTTTGGGCTTCTCACTAAATACTGTGTTAGCAAATATGATAGCGTTTTCCAGTCGGTGGTGAGTCAGGGGTGCGGTCCATCTGAGATGGCAGTTATCGGGTCAGATGCTGCAAGAGCCATTAGTCGGGAAATGCCCGTTGAACTCTTGCGGGCCAGCCTTCCTCATACAAATGAAAACCAGAAGAAAGTGCTACTGGAGTTTGCTCAACGGTCCATGCCTGTTCATAGCAGTGGTGGCACATGA 918 47.06 MLDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGAQLRQRRQVLLEGLATSLQLVDPLGQNGQTAESASKDDFIFLRLVSLSKGRKLLASYLKHLDPGSELTRVVCMAIFRHLRFLFGVLAVDPQAAETINTLIVTVSSSVCGMELRSLGSCLASVVCSPEHPPLRPVGSPAGDGASVVIKSVLERATELLTDPNASTNCSPANRAFWQASFDAFFGLLTKYCVSKYDSVFQSVVSQGCGPSEMAVIGSDAARAISREMPVELLRASLPHTNENQKKVLLEFAQRSMPVHSSGGT 305
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06502 305 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 3 299 IPR039900 GO:0000290(PANTHER)|GO:0000290(InterPro)|GO:0000932(PANTHER)|GO:0003723(PANTHER)|GO:0033962(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06502 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr2:117511366 Amtr09g03207 Amtr-Chr9:83165660 dispersed
Amtr Amtr-Chr2:117511366 Amtr09g03418 Amtr-Chr9:87139533 wgd