AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06555 ATGGTCACTGACGTCACTTACCTTTGTTCTGTTATGAACCAGCAACAATCCATCATCAACGATTCTAAATCAACGGCTCTTATTACTCGTGATTTGCTTGGAGGTGGTCTTGATTCCTCAAAGGAATTAGACCTTGATTTACATGTTCCGTCTGGCTTTGAAAAACGTCTTGATTTGAAGTCAGGAAAAGTTTATCTCCAGAGATGCAAATCACCAAACACTTTATGTTCATCTTCTGATCAAAGAGTTACAAAGCTTCAGGATCTTAACTTCCCTCCATCGTCGAAAAAGCCGTTAAATCTATTCGACGACACGAGTTTAGATCTTAATCTTGTGAATTTATCATCATCATCGTTGTCACCACCGGGTTATAAAAGTGTTTGTACTTTAGATAAAGTTAAGTCTGCACTTGAACGAGCAGAGCGAGAAACGATTAAGAAACGGTCTGTTTCAATACCAAAGTCATGTTCTTCGAACTCTTCGTGTTCGGTTAAAGAAACTATGGTTATTGAAGATGATGATGAGGAGGATGTTGAACGGTCTTCTCAAGCTTACGCTGCTGGTTGTCCGAGTTGTTTGCTTTATGTGTTGATATCGCGAAGCAACCCTAGATGTCCTCGATGCAACATGACTGTACCGTCGCCTACGGTTATGAAGAAACCCCGAATTGATCTTAATATCTCCATTTGA 690 40.0 MVTDVTYLCSVMNQQQSIINDSKSTALITRDLLGGGLDSSKELDLDLHVPSGFEKRLDLKSGKVYLQRCKSPNTLCSSSDQRVTKLQDLNFPPSSKKPLNLFDDTSLDLNLVNLSSSSLSPPGYKSVCTLDKVKSALERAERETIKKRSVSIPKSCSSNSSCSVKETMVIEDDDEEDVERSSQAYAAGCPSCLLYVLISRSNPRCPRCNMTVPSPTVMKKPRIDLNISI 229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06555 229 PANTHER PUTATIVE-RELATED 47 227 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06555 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
11544 Amtr02g06555 Amtr11g00342
359060 Amtr02g04218 Amtr02g06555
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr11:10741551 Amtr02g06555 Amtr-Chr2:118953039 wgd
Amtr Amtr-Chr2:83178968 Amtr02g06555 Amtr-Chr2:118953039 wgd