AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g06557 | ATGGCATCCGCCTTTCTTTCAAGAACACTTCGTTTCCTTCCATCTTTTTCAATCAATCAAAATCAAACCCTCCTTAATCATAAATTTGCTTCCTTTTTCTCTAAGAAACCCCTTCACTCGTGGGCTAGCCCAACCTATACAGCATACAGGAGGACTACCTTGGTTCGTGCTGACATGGCTACACGTGTGGCTGGATCTACTGCTTCTTTCTCAACACGGTCCTTGTCGACTGGTGAGCCTGTTGTTTCAGTCGACTGGCTCCATGCCAATCTACGTGAACCTGACTTGAAGGTGCTGGATGCATCCTGGTACATGCCTGATGAACAGAGAAATCCACTTCAGGAGTACCAGGTTGCCCACATTCCTGGTACTCTTTTCTTTGATGTTGATGGGATATCAGATCGAACTACTAATCTGCCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGACGGAGTTGTTGTTTATGATGGTAAAGGGATCTTCAGCGCTGCTCGTGTCTGGTGGATGTTCCGAGTTTTTGGGCATGATAGAGTATGGGTATTAGATGGAGGGCTTCCGAGATGGCGTGCTTCAGGATTCGATGTTGAATCTAGTGCTTCTGGTGATGCAATTTTGAAAGCTAGTGCTGCCAGCGAGGCGATAGAGAAAGTGTACCATGGCCAGCCTGTTGGTCCAGTTACATTTCAAACAAATTATCAGCCACATCTTGTATGGACACTTGAACAGGTTAAAAAGAACACAGAGGACCAAACACATCAACAGATAGATGCTCGGTCAAAAGCCAGGTTTGACGGTGTTGCAGCTGAGCCTCGAAAAGGAATAAGAAGTGGCCATGTGCCTGGGAGTAAGTGCATTCCTTTTGGCCAGATGTTGGACAGCTCGCAGACACTGCTATCAGCAGACCAGCTCAAGAAAAAGTTTGAACAAGAGGAAATCTCACTCGACAAACCTGTCATCACTTCGTGTGGCACTGGAGTTACTGCATGCATTCTTGCATTGGGACTCCATCGACTTGGGAAGACGGATGTTCCGGTTTATGATGGATCTTGGACAGAGTGGGGAGCACAAGAAGACACCCCAGTTGCAACCTCAGCTGCTGCAGCTACAAGTTCTTGA | 1152 | 46.79 | MASAFLSRTLRFLPSFSINQNQTLLNHKFASFFSKKPLHSWASPTYTAYRRTTLVRADMATRVAGSTASFSTRSLSTGEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGTLFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASGDAILKASAASEAIEKVYHGQPVGPVTFQTNYQPHLVWTLEQVKKNTEDQTHQQIDARSKARFDGVAAEPRKGIRSGHVPGSKCIPFGQMLDSSQTLLSADQLKKKFEQEEISLDKPVITSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAQEDTPVATSAAAATSS | 383 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g06557 | 383 | CDD | TST-Repeat-1 | 81 | 204 | - | - | |
| Amtr02g06557 | 383 | PANTHER | THIOSULFATE SULFERTANSFERASE | 78 | 378 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Amtr02g06557 | 383 | Pfam | Rhodanese-like domain | 251 | 367 | IPR001763 | - | |
| Amtr02g06557 | 383 | Pfam | Rhodanese-like domain | 83 | 202 | IPR001763 | - | |
| Amtr02g06557 | 383 | CDD | TST-Repeat-2 | 251 | 367 | - | - | |
| Amtr02g06557 | 383 | ProSiteProfiles | Rhodanese domain profile. | 267 | 374 | IPR001763 | - | |
| Amtr02g06557 | 383 | FunFam | Sulfurtransferase | 245 | 376 | - | - | |
| Amtr02g06557 | 383 | Gene3D | - | 75 | 215 | IPR036873 | - | |
| Amtr02g06557 | 383 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 253 | 376 | IPR036873 | - | |
| Amtr02g06557 | 383 | Gene3D | - | 245 | 379 | IPR036873 | - | |
| Amtr02g06557 | 383 | SMART | rhod-4 | 250 | 371 | IPR001763 | - | |
| Amtr02g06557 | 383 | SMART | rhod-4 | 82 | 206 | IPR001763 | - | |
| Amtr02g06557 | 383 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 79 | 210 | IPR036873 | - | |
| Amtr02g06557 | 383 | FunFam | Sulfurtransferase | 74 | 216 | - | - | |
| Amtr02g06557 | 383 | ProSiteProfiles | Rhodanese domain profile. | 92 | 209 | IPR001763 | - | |
| Amtr02g06557 | 383 | ProSitePatterns | Rhodanese C-terminal signature. | 355 | 365 | IPR001307 | GO:0004792(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g06557 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Amtr01g00032 | . | 46 | 222 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 30.208 | 1.78e-13 | 70.5 | |
| Amtr01g00311 | . | 7 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 52.809 | 1.28e-57 | 177.0 | |
| Amtr01g06785 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 70.19 | 0.0 | 658.0 | |
| Amtr01g08782 | WGDA | 24 | 146 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 55.645 | 2.07e-43 | 139.0 | |
| Amtr01g09131 | WGDA | 348 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.313 | 1.68e-14 | 70.1 | |
| Amtr01g09132 | WGDA | 348 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.313 | 2.13e-15 | 72.8 | |
| Amtr02g03785 | . | 350 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.434 | 2.37e-15 | 72.8 | |
| Amtr02g03788 | WGDA | 344 | 556 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 29.114 | 1.57e-16 | 77.4 | |
| Amtr02g03789 | WGDA | 343 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.778 | 1.08e-12 | 65.9 | |
| Amtr02g05328 | WGDA | 10 | 149 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 48.936 | 4.39e-46 | 145.0 | |
| Amtr02g06180 | . | 12 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 64.767 | 0.0 | 774.0 | |
| Amtr02g06557 | . | 1 | 372 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 73.067 | 0.0 | 568.0 | |
| Amtr02g07315 | . | 34 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 66.571 | 3.07e-170 | 479.0 | |
| Amtr03g02401 | WGDA | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 70.229 | 4.47e-68 | 201.0 | |
| Amtr03g03177 | . | 162 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 30.319 | 2.02e-19 | 88.6 | |
| Amtr03g03818 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 26.027 | 3.30e-11 | 63.2 | |
| Amtr04g05555 | WGDA | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 69.466 | 2.71e-67 | 199.0 | |
| Amtr05g00327 | . | 72 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.369 | 8.49e-172 | 486.0 | |
| Amtr05g03760 | . | 4 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 65.744 | 2.61e-138 | 390.0 | |
| Amtr05g05242 | . | 352 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 29.358 | 3.09e-16 | 76.3 | |
| Amtr05g05243 | . | 436 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 29.577 | 1.41e-10 | 58.2 | |
| Amtr06g00764 | . | 1 | 233 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 62.705 | 2.90e-108 | 309.0 | |
| Amtr08g01092 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.58e-08 | 49.3 | |
| Amtr08g02418 | . | 56 | 242 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 36.898 | 1.24e-26 | 107.0 | |
| Amtr09g01549 | . | 344 | 526 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 31.088 | 7.42e-12 | 63.5 | |
| Amtr09g02361 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 68.269 | 8.63e-107 | 311.0 | |
| Amtr09g04886 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 66.094 | 1.99e-107 | 307.0 | |
| Amtr11g00227 | . | 104 | 461 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 78.83 | 0.0 | 587.0 | |
| Amtr11g00679 | . | 11 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 52.83 | 2.51e-38 | 124.0 | |
| Amtr11g01958 | . | 1 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 50.0 | 5.80e-131 | 384.0 | |
| Amtr12g00023 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 57.214 | 5.59e-81 | 239.0 |