AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06575 ATGAACGACGGAGGACCGGGGAAGACGGTGGTGCATCCGGCAGTCGAACCTCTGTCATATCTAATCGGAAGGTGGAGAGGCCAAGGAGAAGGCGGTTTCCCAACCATATCCTCTTTTGCTTACGGTGAAGAGCTTAATTTCACTCATCCAGGCAACAAGCCTGTAATAGCTTACTCTCAGAAGACTTGGAAATTGAGTTCTGGAGAGCCTATGCACGCTGAGAGCGGCTACTGGAGGCTAAAACCCGATGGAGCGATTGAGGTTGTCATTGCACAGAGCACTGGTCTTGTTGAAGTTCAGAAAGGAACATATGATGCAGAAAAGAAAGTGGTGAAGCTTCAAAGTGAGCTTGTTGGAAATGCTTCAAAGGTTAAAGAGATAACTCGAGTTTTTACTCTGGTTAATGAAGAATTATCTTATGTGGTTGAAATGGCTACCAATCTCACCAATCTTCAACCACATCTGAAAGCTTCTCTTAAGAAGATCTAA 489 44.79 MNDGGPGKTVVHPAVEPLSYLIGRWRGQGEGGFPTISSFAYGEELNFTHPGNKPVIAYSQKTWKLSSGEPMHAESGYWRLKPDGAIEVVIAQSTGLVEVQKGTYDAEKKVVKLQSELVGNASKVKEITRVFTLVNEELSYVVEMATNLTNLQPHLKASLKKI 162
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06575 162 CDD lipocalin-heme-bd-THAP4-like 15 162 IPR014878 -
Amtr02g06575 162 SUPERFAMILY Lipocalins 11 162 IPR012674 -
Amtr02g06575 162 PANTHER THAP4 PROTEIN 10 162 IPR045165 -
Amtr02g06575 162 Gene3D - 10 162 IPR012674 -
Amtr02g06575 162 Pfam THAP4-like, heme-binding beta-barrel domain 15 161 IPR014878 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06575 K23205 THAP domain-containing protein 4