Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g06581 | ATGGAGTTTAAATCGCGTGATTACAGAGCTGAAGCAGCAGCCTATTCACTCCCTCGTGTTTCCGCATCTTCACATCCTCTTTGTTCGTCTTCATCTCCATCACATACGCAGGATAATGTGAGCATTGAATTTTTTGACCCCCTAAGGGGTCCTTCAGCAGAAATATCGGAGCCTGTTGAAGATACGGCTGTGGCAGAAAAACGTCCTGCTAGTCAACCCACCTCTCATCTATCGGCAAAGGAATGGACATCTTTCAATAAGTTGTTAATGCAGAGATTTCCTGTGCCAAAAATGATTTCAGTTTCTGCTTTGTCAAGCAAGACTATAAAAGGCAAGAAGGCAATTGGAGAACTACCAGTAAATACGCAGTCAGATGAACTGAATGATTCTGAAAAGTTGAACGAAAAAGGATTTAAGACTGTAAGCCAGCAGGTGTATATAAGACGATTGCATGAACTTAAAGACGAGATCAAGCGTTCTTGGCATTCTGGTGATCGTGTGACATCTTTAAAGTTGTCAATTAAGGTTGCTAGGCTTCTGATGGACACTTGTGTGGCACAATTTTATCCAACTTTATTTGTTCTAGCTACTGATATAATGGATATGTTAGGTGAGATGGTATGGGAGCGAATTAGGGAGAAAGCTGAGTTTGCAGATGACGGGACAAAGGTTTGCACTTTACCAGATGACTTTGAAGCAAGTAGTATATGCCTTGAAGCCAAAGAGACGTGCAATAATTGGTTCAGAAAAATTGCCTCCATCCATGAGCTTCTTCCACGCATCTATCTTGAGCTTGCTATATTTCCATGTTGGCGGTTCCTGCGTGATGATATCACGGATAACCTTGTGCGTCTAGTTATGATGATAAGAGGAATTGCAGATCCATTGGCTTCAGCCTACTGCCGCTTCTTTTTGATTCACTGTGCCCAAAAACTTCCCCAGCGCGATACAGGACATCTAGTAAATTGCATCAGTGATCAAAAAATTATATTTAGGCAAATTGTATCTACGAAAGAAACCAAGTATGGAAACTTTTTGGGAGATCACAAGTTGCTTATCAGCTTGATGGAACCTACAATTGAATATACTATGAGATGCATTTTTAAGGATCCAAATAAGATTGCTGATATGATTGTGAGACTTGAATTAGGGAAAAGCCCATTAGAATTACATGGGAAAGTTCCTTGGATATCAATACTCTTCCATTATTTACTCAAGGAGCTCCCAACTGAAGTAGTTTGTTCCAATGCATTAGAAATTCTCCACCTTGTTGACTGCAGTAATGATTTTTCGTTTGACCAGTGTTTAAATTACAAGATGCTTGGGTTGAAGCTTTGTGAGGGAATAGATCAAGTGAACACAGTTGATGCAGTAATTAATGAAGTACTTCAGGCTGCTACCAAAAAGAAGATCCTTGATGAGTACTTGAAGATCGTTGATGCTTATATGGATATTATTCTTCATTACAATATGGATCAATCTCTAAGTTCCATTCTAAGTGAAGTTTTTGAAAGATTGTGCAATGAAGTGATTACCGAAGATGAACTTTCTACACTGCAATCAATTTTTGTGAAGCTGATCACACATTTTGATGATATGAAATATATTTTTGACCTGAATTACTTTGTTGACATATTAGATGCCATGCATGGGAGCTCAAGAAGCATTGTATGTATGCACATCCTCACCAAGGCCACAAGAAATGATCACATTGATGATCCTACAACGGTAAAACTGCTTTTTGATGTTGCTCAGTCTCTGCATGATAATGTTGACTTTTCAAACACGAGACCGGATGATAATCAACAGGCAGAGCGTTTGGTTGCTCGTTTTGTTGATAAGGTTGACCATGGTATGGAGTTGGATCGCCATTTGACATTCTTGGTTGAGTGTCGTGGAGCTTTCAGCAGCATGAATGATTTGAAGGAGATCCTTGTTCATTCTAGCAATCTTCTAGCAACCAGAGCTTTGAGAGAGAAAAAAAATAATCTCAATTTTATCAAATCTTGCATCACTTTTAATGAAGTTACAATACCATGTATTCCATCTTATGCCAGGCAGTTAATCTTATATCTTGAAACCGCAGAGGTTTCTTTGTTTGGAGGCTTGATTTCTCATGCAGATGGACTTCTAGATTCTGCAGTTTGCTGCTTACAAAATGTTTCTTTGGTAGATGGCTTGCGGAAATCCAATGAAGATGCTGATGGAATTGTTTCCTTAACTAGAAAGCTGTGCAGCTTCCTGCTCTTGGTTCCAGGTAATTTGGAACAAGGAGCTATGTACATTCCAAAGAGCGTATTATCCTTGCTTGATTCACAATCATGGGTTACACCAAAACTAAGGATAAGGCTCTTATGTTCTCTTCTTTCATTATCTGCAACATTTGCTCAAAATGAGCTCCCATATCATGCAATTCATGAAGAGGTTATTGGCAATGACCGTTTATTCCTTGGTGATGCAATGTATTCCCAAGAACTCGGGTCGTTATCTAGGGTTATTCTTCATAACATTGTTGATACTATTGTACAAGAACCTTCACAGGTTATGCGAGGAAAACTGGCACTTGAAGCTTGCAACTGTATCGCCTCTTTTTTTAGAGTGAATCATGAGGTATCGTCTGTTTGCTCTAAGCTGATGGAAACGGCCGCATCATGTCTTGGAGGTGATGATAAGTATTTGCAGTCAACTGTTAAGTTTGTGCATAAACAGGCCCCATTATCCGTTGGGGGAGAATGA | 2736 | 39.4 | MEFKSRDYRAEAAAYSLPRVSASSHPLCSSSSPSHTQDNVSIEFFDPLRGPSAEISEPVEDTAVAEKRPASQPTSHLSAKEWTSFNKLLMQRFPVPKMISVSALSSKTIKGKKAIGELPVNTQSDELNDSEKLNEKGFKTVSQQVYIRRLHELKDEIKRSWHSGDRVTSLKLSIKVARLLMDTCVAQFYPTLFVLATDIMDMLGEMVWERIREKAEFADDGTKVCTLPDDFEASSICLEAKETCNNWFRKIASIHELLPRIYLELAIFPCWRFLRDDITDNLVRLVMMIRGIADPLASAYCRFFLIHCAQKLPQRDTGHLVNCISDQKIIFRQIVSTKETKYGNFLGDHKLLISLMEPTIEYTMRCIFKDPNKIADMIVRLELGKSPLELHGKVPWISILFHYLLKELPTEVVCSNALEILHLVDCSNDFSFDQCLNYKMLGLKLCEGIDQVNTVDAVINEVLQAATKKKILDEYLKIVDAYMDIILHYNMDQSLSSILSEVFERLCNEVITEDELSTLQSIFVKLITHFDDMKYIFDLNYFVDILDAMHGSSRSIVCMHILTKATRNDHIDDPTTVKLLFDVAQSLHDNVDFSNTRPDDNQQAERLVARFVDKVDHGMELDRHLTFLVECRGAFSSMNDLKEILVHSSNLLATRALREKKNNLNFIKSCITFNEVTIPCIPSYARQLILYLETAEVSLFGGLISHADGLLDSAVCCLQNVSLVDGLRKSNEDADGIVSLTRKLCSFLLLVPGNLEQGAMYIPKSVLSLLDSQSWVTPKLRIRLLCSLLSLSATFAQNELPYHAIHEEVIGNDRLFLGDAMYSQELGSLSRVILHNIVDTIVQEPSQVMRGKLALEACNCIASFFRVNHEVSSVCSKLMETAASCLGGDDKYLQSTVKFVHKQAPLSVGGE | 911 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g06581 | 911 | MobiDBLite | consensus disorder prediction | 22 | 40 | - | - | |
| Amtr02g06581 | 911 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
| Amtr02g06581 | 911 | PANTHER | ESOPHAGEAL CANCER ASSOCIATED PROTEIN | 2 | 903 | IPR029705 | GO:0005768(PANTHER)|GO:0032456(InterPro)|GO:0032456(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g06581 | K25731 | VPS35 endosomal protein-sorting factor-like |