AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06581 ATGGAGTTTAAATCGCGTGATTACAGAGCTGAAGCAGCAGCCTATTCACTCCCTCGTGTTTCCGCATCTTCACATCCTCTTTGTTCGTCTTCATCTCCATCACATACGCAGGATAATGTGAGCATTGAATTTTTTGACCCCCTAAGGGGTCCTTCAGCAGAAATATCGGAGCCTGTTGAAGATACGGCTGTGGCAGAAAAACGTCCTGCTAGTCAACCCACCTCTCATCTATCGGCAAAGGAATGGACATCTTTCAATAAGTTGTTAATGCAGAGATTTCCTGTGCCAAAAATGATTTCAGTTTCTGCTTTGTCAAGCAAGACTATAAAAGGCAAGAAGGCAATTGGAGAACTACCAGTAAATACGCAGTCAGATGAACTGAATGATTCTGAAAAGTTGAACGAAAAAGGATTTAAGACTGTAAGCCAGCAGGTGTATATAAGACGATTGCATGAACTTAAAGACGAGATCAAGCGTTCTTGGCATTCTGGTGATCGTGTGACATCTTTAAAGTTGTCAATTAAGGTTGCTAGGCTTCTGATGGACACTTGTGTGGCACAATTTTATCCAACTTTATTTGTTCTAGCTACTGATATAATGGATATGTTAGGTGAGATGGTATGGGAGCGAATTAGGGAGAAAGCTGAGTTTGCAGATGACGGGACAAAGGTTTGCACTTTACCAGATGACTTTGAAGCAAGTAGTATATGCCTTGAAGCCAAAGAGACGTGCAATAATTGGTTCAGAAAAATTGCCTCCATCCATGAGCTTCTTCCACGCATCTATCTTGAGCTTGCTATATTTCCATGTTGGCGGTTCCTGCGTGATGATATCACGGATAACCTTGTGCGTCTAGTTATGATGATAAGAGGAATTGCAGATCCATTGGCTTCAGCCTACTGCCGCTTCTTTTTGATTCACTGTGCCCAAAAACTTCCCCAGCGCGATACAGGACATCTAGTAAATTGCATCAGTGATCAAAAAATTATATTTAGGCAAATTGTATCTACGAAAGAAACCAAGTATGGAAACTTTTTGGGAGATCACAAGTTGCTTATCAGCTTGATGGAACCTACAATTGAATATACTATGAGATGCATTTTTAAGGATCCAAATAAGATTGCTGATATGATTGTGAGACTTGAATTAGGGAAAAGCCCATTAGAATTACATGGGAAAGTTCCTTGGATATCAATACTCTTCCATTATTTACTCAAGGAGCTCCCAACTGAAGTAGTTTGTTCCAATGCATTAGAAATTCTCCACCTTGTTGACTGCAGTAATGATTTTTCGTTTGACCAGTGTTTAAATTACAAGATGCTTGGGTTGAAGCTTTGTGAGGGAATAGATCAAGTGAACACAGTTGATGCAGTAATTAATGAAGTACTTCAGGCTGCTACCAAAAAGAAGATCCTTGATGAGTACTTGAAGATCGTTGATGCTTATATGGATATTATTCTTCATTACAATATGGATCAATCTCTAAGTTCCATTCTAAGTGAAGTTTTTGAAAGATTGTGCAATGAAGTGATTACCGAAGATGAACTTTCTACACTGCAATCAATTTTTGTGAAGCTGATCACACATTTTGATGATATGAAATATATTTTTGACCTGAATTACTTTGTTGACATATTAGATGCCATGCATGGGAGCTCAAGAAGCATTGTATGTATGCACATCCTCACCAAGGCCACAAGAAATGATCACATTGATGATCCTACAACGGTAAAACTGCTTTTTGATGTTGCTCAGTCTCTGCATGATAATGTTGACTTTTCAAACACGAGACCGGATGATAATCAACAGGCAGAGCGTTTGGTTGCTCGTTTTGTTGATAAGGTTGACCATGGTATGGAGTTGGATCGCCATTTGACATTCTTGGTTGAGTGTCGTGGAGCTTTCAGCAGCATGAATGATTTGAAGGAGATCCTTGTTCATTCTAGCAATCTTCTAGCAACCAGAGCTTTGAGAGAGAAAAAAAATAATCTCAATTTTATCAAATCTTGCATCACTTTTAATGAAGTTACAATACCATGTATTCCATCTTATGCCAGGCAGTTAATCTTATATCTTGAAACCGCAGAGGTTTCTTTGTTTGGAGGCTTGATTTCTCATGCAGATGGACTTCTAGATTCTGCAGTTTGCTGCTTACAAAATGTTTCTTTGGTAGATGGCTTGCGGAAATCCAATGAAGATGCTGATGGAATTGTTTCCTTAACTAGAAAGCTGTGCAGCTTCCTGCTCTTGGTTCCAGGTAATTTGGAACAAGGAGCTATGTACATTCCAAAGAGCGTATTATCCTTGCTTGATTCACAATCATGGGTTACACCAAAACTAAGGATAAGGCTCTTATGTTCTCTTCTTTCATTATCTGCAACATTTGCTCAAAATGAGCTCCCATATCATGCAATTCATGAAGAGGTTATTGGCAATGACCGTTTATTCCTTGGTGATGCAATGTATTCCCAAGAACTCGGGTCGTTATCTAGGGTTATTCTTCATAACATTGTTGATACTATTGTACAAGAACCTTCACAGGTTATGCGAGGAAAACTGGCACTTGAAGCTTGCAACTGTATCGCCTCTTTTTTTAGAGTGAATCATGAGGTATCGTCTGTTTGCTCTAAGCTGATGGAAACGGCCGCATCATGTCTTGGAGGTGATGATAAGTATTTGCAGTCAACTGTTAAGTTTGTGCATAAACAGGCCCCATTATCCGTTGGGGGAGAATGA 2736 39.4 MEFKSRDYRAEAAAYSLPRVSASSHPLCSSSSPSHTQDNVSIEFFDPLRGPSAEISEPVEDTAVAEKRPASQPTSHLSAKEWTSFNKLLMQRFPVPKMISVSALSSKTIKGKKAIGELPVNTQSDELNDSEKLNEKGFKTVSQQVYIRRLHELKDEIKRSWHSGDRVTSLKLSIKVARLLMDTCVAQFYPTLFVLATDIMDMLGEMVWERIREKAEFADDGTKVCTLPDDFEASSICLEAKETCNNWFRKIASIHELLPRIYLELAIFPCWRFLRDDITDNLVRLVMMIRGIADPLASAYCRFFLIHCAQKLPQRDTGHLVNCISDQKIIFRQIVSTKETKYGNFLGDHKLLISLMEPTIEYTMRCIFKDPNKIADMIVRLELGKSPLELHGKVPWISILFHYLLKELPTEVVCSNALEILHLVDCSNDFSFDQCLNYKMLGLKLCEGIDQVNTVDAVINEVLQAATKKKILDEYLKIVDAYMDIILHYNMDQSLSSILSEVFERLCNEVITEDELSTLQSIFVKLITHFDDMKYIFDLNYFVDILDAMHGSSRSIVCMHILTKATRNDHIDDPTTVKLLFDVAQSLHDNVDFSNTRPDDNQQAERLVARFVDKVDHGMELDRHLTFLVECRGAFSSMNDLKEILVHSSNLLATRALREKKNNLNFIKSCITFNEVTIPCIPSYARQLILYLETAEVSLFGGLISHADGLLDSAVCCLQNVSLVDGLRKSNEDADGIVSLTRKLCSFLLLVPGNLEQGAMYIPKSVLSLLDSQSWVTPKLRIRLLCSLLSLSATFAQNELPYHAIHEEVIGNDRLFLGDAMYSQELGSLSRVILHNIVDTIVQEPSQVMRGKLALEACNCIASFFRVNHEVSSVCSKLMETAASCLGGDDKYLQSTVKFVHKQAPLSVGGE 911
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06581 911 MobiDBLite consensus disorder prediction 22 40 - -
Amtr02g06581 911 MobiDBLite consensus disorder prediction 18 40 - -
Amtr02g06581 911 PANTHER ESOPHAGEAL CANCER ASSOCIATED PROTEIN 2 903 IPR029705 GO:0005768(PANTHER)|GO:0032456(InterPro)|GO:0032456(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06581 K25731 VPS35 endosomal protein-sorting factor-like