AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06603 ATGGCTGATTTCGAACCACCTTCCTTCTCTTTAGGCCTCGATTATAACCTATTCGATTCAGAGCCCCAAATTACTCCTCTAACTCAACATACACCTCATTCTTCTTCGAATCAGTTATCTGTAGCATTTACAACCTTCAAAGACAACGATGACGATTTTGAAACCCTAGTTGTCGACGATTCGGAGCCTGAGTATCCGGATTCGGATCCGAAGCTGAACCGCCGCCGCCGTCGTCGTAGCCTCACCGTCGGCGCCACGTCATCATCTTCACCGCTTTTGCATTCAGATACAGATCAACATCTTCATACACAGCATCATAGGGTGTGTACCCGTTTAAATGGTCTAGAGCCGGTTACAGCAAGCTGCGATAACGCGGTGTTTCCAAAGTTAACTGCCAGTCCTGTTAGAGGATTTTGTTTGAATCATTCTGACTCGGATTCTTGTGACCGTGTTGTCAGTAGAAAGTGTAATGGATCGGATTCGAATTTGAATCATGGGAAGTTTGATGATCTTCCTCAACATGTAAAGAGGAAGCAAAATGTTTCATTTGCATGGGGAGATTTCCCGAAGGCTTATCGTTATTTTTTTCATGATGATCCTAGGATCCAAGAGCTTGTTCGAAGTCGCCTACCTAATTTTTTCCCTTTGGGTAACATGTTCAACATAGATATTGAGCAGCCCAGTACATCAAAGATTGATTATATGGGGCAATTTAGCTTTGATGAAAGCTCAAAACAAGCTGCTAGAACTATCAAAGATAGGAAAAGTTCAACTAGCAGGAAAAATTCAAGAAAATCCAAAACTGAAGAGATGTCACAAGGTTGGGTAAATCCAAAGCTTGGTGTTGATCAAGTGACACCAAAAGGAGCTGTGAAAAGAAAGGTTCATGCAGCCCGCCAAAGTGCTGGTCAATGGTTAACAAGTTCGGATGGAAAGAAAGTCTATGTTGGTAAAAGCGGTCAGGAGTTGACTGGCCGAGTTGCATACATGCAGTACAAAAAGGAAAGTGGATTCGGGTTTAGAAAGATAGAGAGGAAATCTGTTGCCAAGAAGAAGAAATGA 1062 42.66 MADFEPPSFSLGLDYNLFDSEPQITPLTQHTPHSSSNQLSVAFTTFKDNDDDFETLVVDDSEPEYPDSDPKLNRRRRRRSLTVGATSSSSPLLHSDTDQHLHTQHHRVCTRLNGLEPVTASCDNAVFPKLTASPVRGFCLNHSDSDSCDRVVSRKCNGSDSNLNHGKFDDLPQHVKRKQNVSFAWGDFPKAYRYFFHDDPRIQELVRSRLPNFFPLGNMFNIDIEQPSTSKIDYMGQFSFDESSKQAARTIKDRKSSTSRKNSRKSKTEEMSQGWVNPKLGVDQVTPKGAVKRKVHAARQSAGQWLTSSDGKKVYVGKSGQELTGRVAYMQYKKESGFGFRKIERKSVAKKKK 353
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06603 353 MobiDBLite consensus disorder prediction 59 99 - -
Amtr02g06603 353 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 83 - -
Amtr02g06603 353 MobiDBLite consensus disorder prediction 82 97 - -
Amtr02g06603 353 MobiDBLite consensus disorder prediction 246 268 - -
Amtr02g06603 353 MobiDBLite consensus disorder prediction 245 275 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06603 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
11552 Amtr02g06603 Amtr07g01429
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
199616 Amtr Amtr02g06603 Amtr-Chr2:119648182 Amtr03g02993 Amtr-Chr3:62678006
297826 Amtr Amtr02g06603 Amtr-Chr2:119648182 Amtr02g07746 Amtr-Chr2:142236760
302362 Amtr Amtr02g06603 Amtr-Chr2:119648182 Amtr07g01429 Amtr-Chr7:19593175