AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06605 ATGGACCCAGTGAACGAAGAAGGAAGTCCAAATGCCACACTAGTTGGTCCTGAAAAACGAAAACGTGGCCGCCCACGTAAGGATCCAAGTGAGAAACGTGCCCAAAGAGCTCGTTCACAAGCCGCTGCTCACATGCCACCTGGTTTTGCACCACTGACCAACAAAACTCCTCGAGTTGACCCGATCAATGATCCAACTGAAGTCATGGTTGGACAGATTGTAACTGGCGTTGTTCAAGCAACTTTTGATGCGGGTTACCTGCTCGCGGTTAGGATTGGGAACTCAAAGATCACACTAACGGGTGCAGTTTTCAAACCTGGCCTCACTGCACCTGTGACACCTGAAAATGACGTGGCACCTCATGTTGACATGATCAAACGAACTGAAGTTCCATTTCCAACAGAACTCCAGCCCAAACGTAGGCGTAAACGAAGATCAAAAGAGAAAAATATGCAGCTTGTTACTTATGAAGGGAATGGGCCAGACTCCGCGGTTAGAAATTCACCGCCTAAAACCGCCCCCTCAGTTCCACAGGTTGGTGCGAAAGGAAGCGTGGTCCCTGTTGTTCTTCAACCGATTAACCTATCAAACGGTTTATCCACCAACCAACCTGCACCTCATTTACGGGCCTCACATGGCAAACCGGTGCACTCAGTTCTGCCATTGTCTGTTTACCCGCCAAACAGGTCAACTAGCCAAGTGTCTGATTCTCAAGCAAGCTCACAGTTTGCAGCTACACCCACTGAGTCTGGAAATGAGAATGCCTCTTTTAAACACACAGAAGGGGGTACAGCGGTGAAATCAAGTGATGTGCAAGATCGAGTTGTGAAAAAAGAATCAGATATTAGTGATATGAACGAGCCTCTTTTTGTTGAACCCTTGCGAACTAGACACACTGTCCAACATTTCCAACCTCCACCAGGATTGGGAGGTATGATGCATGGTGGCACAGGGAGAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAAGATGAGCAATGACCAGGTTTCTCCAAATGGACATCCAACTGCAAGTTACAATGGAAGTGGTCAGGCAGGAAGGATGTGA 1068 48.03 MDPVNEEGSPNATLVGPEKRKRGRPRKDPSEKRAQRARSQAAAHMPPGFAPLTNKTPRVDPINDPTEVMVGQIVTGVVQATFDAGYLLAVRIGNSKITLTGAVFKPGLTAPVTPENDVAPHVDMIKRTEVPFPTELQPKRRRKRRSKEKNMQLVTYEGNGPDSAVRNSPPKTAPSVPQVGAKGSVVPVVLQPINLSNGLSTNQPAPHLRASHGKPVHSVLPLSVYPPNRSTSQVSDSQASSQFAATPTESGNENASFKHTEGGTAVKSSDVQDRVVKKESDISDMNEPLFVEPLRTRHTVQHFQPPPGLGGMMHGGTGRMTELLQAVQQKMSNDQVSPNGHPTASYNGSGQAGRM 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06605 355 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 339 IPR045881 -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 17 38 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 225 267 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 225 278 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 331 355 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 156 179 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 156 174 - -
Amtr02g06605 355 MobiDBLite consensus disorder prediction 1 56 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06605 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
359050 Amtr02g04189 Amtr02g06605
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
199618 Amtr Amtr02g06605 Amtr-Chr2:119674049 Amtr10g01746 Amtr-Chr10:32486412
260079 Amtr Amtr04g02230 Amtr-Chr4:40065836 Amtr02g06605 Amtr-Chr2:119674049
298059 Amtr Amtr02g04189 Amtr-Chr2:82872339 Amtr02g06605 Amtr-Chr2:119674049