AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06650 ATGGATGATATATTCGTAGCAATCCTTTCAATGCTTCTTCTTGTTGCCTTAATTCCACTTTACCTTTGGAAACGCCGTCAGGTTCCCCAATCACGTGACGACCACGATGAACAACCCCAGATTCAGCAGAGGGAAGCTGTTGTTAGACCAGCTGGTGCCCGAAGCCGAATGCGAAGAAGGAATACGTCGGCAGCCAGCTCATCGTCTGCTCCACAAACTGTTGAAGCAGAAACTGAGGATGGAAGTGATGAAGAAGAGGTTGAAGGGGAGTACTATAATGCGAAAGCGTCGAAGAAGAAAGGAAGGAAGAAAGAGGAACGCCAGGCACAGCGACAAGCTGAAGAGGCTGCAAGGGAGTCGAGAAACACAAAACAAGATCGTTATGCAGAAATGCGCAGGAGGAAAGATGAGGAGCATGAAGCAAGGGAACGGATGCTGGAAGAAGAAGCCGAGGCTCGAAAGGCTAAAGAGGAGGAAGCAGCAGCTTTAGAGTTTGAGAAATGGAAAGGGGAGTTTTCAGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACACATGGTTTGCTTTTTGATTTTGTGGAGTACATTAAGAAACAGAAATGTGTTCCATTGGAAGATCTTGCTGCAGAATTTAAACTAAGGACTCAGGATTGTATCAATCGAATCACCTCATTGGAAGATATGGGGAGATTGTCGGGTGTGATGGACGATAGAGGAAAGTACATATACATATCTCATGAAGAAATGCAGGCAGTTGCAGACTACATCAAGCGCGAAGGTCGTGTCAGCATTGCACATCTAGCAAGCCAGTCAAATCAGTTCATAGATTTGGAACCCAAACCACAGTTTGTTGAGGATTTAAGCACTGCAGATGAGATTACAGTCGCTTGA 900 45.22 MDDIFVAILSMLLLVALIPLYLWKRRQVPQSRDDHDEQPQIQQREAVVRPAGARSRMRRRNTSAASSSSAPQTVEAETEDGSDEEEVEGEYYNAKASKKKGRKKEERQAQRQAEEAARESRNTKQDRYAEMRRRKDEEHEARERMLEEEAEARKAKEEEAAALEFEKWKGEFSVDAEGTTENEVQDGTHGLLFDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKPQFVEDLSTADEITVA 299
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06650 299 SMART DDRGK-2 94 279 IPR019153 -
Amtr02g06650 299 SUPERFAMILY Winged helix DNA-binding domain 186 255 IPR036390 -
Amtr02g06650 299 MobiDBLite consensus disorder prediction 106 152 - -
Amtr02g06650 299 FunFam DDRGK domain-containing protein 1 190 247 - -
Amtr02g06650 299 Pfam DDRGK domain 94 279 IPR019153 -
Amtr02g06650 299 Coils Coil 128 166 - -
Amtr02g06650 299 Coils Coil 99 126 - -
Amtr02g06650 299 MobiDBLite consensus disorder prediction 31 152 - -
Amtr02g06650 299 Gene3D - 190 247 IPR036388 -
Amtr02g06650 299 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 88 293 IPR050899 -
Amtr02g06650 299 MobiDBLite consensus disorder prediction 59 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06650 K23344 DDRGK domain-containing protein 1