Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g06774 | ATGTTAGAAGGTAAAGCGGTGATAGGGGAGACTGATATGCTTCAAGCCATGCAAGATGATGCACTTCAACTCGCAACGAAAGCACTTGATTTCTTTGATGTCACCGAGGCTACTGAAATTGCACGAGTAGTCAAACAGGAATTCGATAAGATGTATGGAGGTGGATGGCAATGTATCGTAGGGACTAATTTTGGGTCATTTGTGACCCATTGTTATGGTTCTTTCATTCATTTTTCTGTTGGGAGTCTTGCGATTTTGCTGTTTAGAGGATCATCAGTTGCTTTAGAGATTGATGAATTTTCGAGTTTGGATGGTGTAAAAACATGA | 327 | 40.37 | MLEGKAVIGETDMLQAMQDDALQLATKALDFFDVTEATEIARVVKQEFDKMYGGGWQCIVGTNFGSFVTHCYGSFIHFSVGSLAILLFRGSSVALEIDEFSSLDGVKT | 108 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g06774 | 108 | SMART | Dynein-light-2 | 1 | 90 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Amtr02g06774 | 108 | CDD | DLC-like-DYNLL1-DYNLL2 | 5 | 89 | - | - | |
| Amtr02g06774 | 108 | Gene3D | Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 2 | 90 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Amtr02g06774 | 108 | FunFam | Dynein light chain | 1 | 90 | - | - | |
| Amtr02g06774 | 108 | SUPERFAMILY | DLC | 1 | 90 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Amtr02g06774 | 108 | PANTHER | DYNEIN LIGHT CHAIN | 7 | 89 | IPR001372 | GO:0005868(PANTHER)|GO:0007017(InterPro)|GO:0030286(InterPro)|GO:0045505(PANTHER) | |
| Amtr02g06774 | 108 | Pfam | Dynein light chain type 1 | 5 | 89 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g06774 | K10418 | dynein light chain LC8-type |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 359038 | Amtr02g04155 | Amtr02g06774 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:105801241 | Amtr02g06774 | Amtr-Chr2:122850952 | dispersed | |
| Amtr | Amtr-Chr2:122850952 | Amtr11g02234 | Amtr-Chr11:48632671 | dispersed | |
| Amtr | Amtr-Chr7:371943 | Amtr02g06774 | Amtr-Chr2:122850952 | transposed | |
| Amtr | Amtr-Chr7:37624382 | Amtr02g06774 | Amtr-Chr2:122850952 | transposed | |
| Amtr | Amtr-Chr2:82399261 | Amtr02g06774 | Amtr-Chr2:122850952 | wgd |