AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g06782 ATGACTGCAATCTTATCCTTCACTACATCCCCAATCCACTTCAAACTAAATAATAATAATAATAATAATTCAAATAAAACCCTAATTCCATTTCAGTCAACCTCTCGAATCACTATACCTAATAATCATCAACAACATTCTGCTCCTCCGTTATTCATTCCAGAGGTTGAAAGCGCAGTTGATAAGCTGTACCCCGAATTCAGGGCGATTGATAATCTTGTGGCGCGCAATACATCTAGAGTTCTCAAAGCCTTTCAGAATGCTAGAGTTGGTTCTCATCATTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGTGGCCGAGAAGCTCTTGATCAAGCTTTTGCAGAAATTTTTGGCGCTGAATCTGCAATTGTTCGGGCGCAGTTCTTTTCAGGGACTCATGCTATTACCTGTGCGCTTTTTGCTTTCTTGAGGCCTGGTGATGAGCTTTTGGCGGTTGCTGGTGCTCCGTATGATACACTAGAGGAAGTTATAGGAATCAGAGATAGTAATGGATTAGGTTCCCTAAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGATGATGGAGGGCTTGATTGGGATGCTCTCGAGGTTGCTATAAGACCTCAAACAAAATGTGCTCTTATTCAAAGATCATGCGGGTATTCTTGGCGTAAAAGTTTGAGTGTGAATGAAATTTCTAGTGCAATACACATCATCAAGTCACAGAATCCAAACTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTATTGCAGGAAGTTTAATTAAAAATCCAGGTGGAACGATTGCACCATGTGGCGGATACGTTGCAGGGAAAGAAAAATGGGTAAAAGCAGCAGCCGCCCGTCTCTCTGCACCAGGTCTTGGGGTTGACTGCGGGTCGACTCCTGGTGATATTATGAGAACATTCTTTCAAGGATTATATCTCTCACCTCAAATGGTTGGGGAATCAGTTAAGGGAGGTTTACTTATCGCTGAAGTTATGTCCACAAAAGGTTACAAAGTCCAGCCGCTTCCTCGGGTACCCCGTCACGACATAGTACAGGCTGTACAACTTGGAAGCCGAGAGAAGCTTCTTGCTTTCTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCTTATACAAAACCGATTGCAGGTTTGACAGCTGGCTATGCATCAGAGGTGATCTTTGCTGACGGGACGTTCATAGATGGCAGCACAAGTGAACTCTCGTGTGATGGACCGTTAAGGGAGCCTTTCTGTGTGTTCTGTCAGGGAGGCACTCATTGGACTCAGTGGGGGCTAGTTCTGGGTGAAGTTTTGAATTCTTTGTAG 1377 44.08 MTAILSFTTSPIHFKLNNNNNNNSNKTLIPFQSTSRITIPNNHQQHSAPPLFIPEVESAVDKLYPEFRAIDNLVARNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRAQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSNGLGSLKDFGISYREVALADDGGLDWDALEVAIRPQTKCALIQRSCGYSWRKSLSVNEISSAIHIIKSQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGESVKGGLLIAEVMSTKGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLNSL 458
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g06782 458 SUPERFAMILY PLP-dependent transferases 76 446 IPR015424 -
Amtr02g06782 458 Pfam Methionine gamma-lyase 56 456 IPR009651 -
Amtr02g06782 458 Gene3D - 313 458 - -
Amtr02g06782 458 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 33 458 IPR009651 -
Amtr02g06782 458 Gene3D - 104 312 IPR015421 -
Amtr02g06782 458 Gene3D - 53 103 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g06782 - -