Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr02g06787	ATGGCTCATTTGTTAGCTCAGTTTCAGTCCATCAAGATTTCATGTGACGGCCTCGTGATTGCCGTGAAAGATGTGAGTGATTTGTGGCCTCTTGTGAAGGAAAAATTCGAGGAACGCCTTCCGTTTAAACGAGCTATATTAAACAACAAAAACCATAATCCTGTAACTGTGGATAACCTGCAAGTTGAGTTTTTATTAACTACTGATTCAAGGATCAAAAGCCGGGTGCCGCAGGATCAACAGTTCTTTTGTTTTCAAGAACCATATGCAACTGTGGTTCTTGTAGCATGTGAGGATCTAGAGGAGTTCAAGACAGTGCTAAAACCGCGTTTGAAGTTGATTTTGCAAAATGAAGAGGAGTGGTTTATTGTGTTTGTATCCAAAGCGTCATCAGACAAGGACCCGGCGAGCAAGATGGAAAAAAAGGTTTATGCCAGACTTGAAATTGATTTTAATTCAAGAAAGAGAGAAAGGTGCTGCAAGTATGACTTACATGACACTGTAGTAACCTTTTGGAATGATTTTGAACTCAAAATCATGGAGTGCATTCGAAACACTTTTGATACGCGCGTCCAGTTCTATGAGGACGAGATTCTTAAGCTCAATGAACAACGTCTTACGCCTGTTTGGAGCTTCTGTAACTTTTTCATCCTCAAAGAAAGCCTAGCATTTATGTTAGAGATGGCTAATCTTCATGAGGATTCACTGTGCGCATATGATGAACTAGAGTCGTGTTACATGGAAACAGTAAAAAATGCAGACGAAAAGAGGGAATTTGGAGGAATGGAGCATGGAGATGATCAATCTGCGATGCTAAGCCGTAACAACAAGCAATTGACACATATTGTTCTAGAAACTTCCTTTAGGGAGTTTGAATTCCATCAGTACATATTTGCATGTCAAGCTAAGCTGTTGTTTGATCTACAGCGTCCATTTGACGTTGCATCAAGAGGGTTCTCATTTATTGTGAGTTTCTCAGAAGCATTGGCCCGGCACGAGAGTAATTTGCCTTTCTGTATGAAGGAAGTTTGGGTCCTTACCTCATGTTTGAGCTTGATCAATGCAACTGCTGACCATTATAGAGATGGACAAGTTCCATCAGATGTAGAAAGAGAATATTATTGTATACGGGCTGAACTATATTCTCTATCCCGAGTTAAGTTCATGAGGCTTGCATATCTAATCGGGTTCGGATCTCATATAGAAAGAAGTCCACTCAACAGTGCTTCACTTAGCATGTTACCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCCTCTAATGCTTCATCTGAGGTTCTTGACAAAGAAAAGACAATTGTTCAAGTTAGTCCAAGAATCAAGCACTTTGGTATTGAGAGTAAACCGTTGTCACTTGAACCGTCTTCTCTTCTGTCTGATGCTTCTCATCAAAAGACTGAGAGCTCGGTTGATACCACGAGACTTGCAGAAGTTTTTGTGGCTGCTGAACACGCTCTTCGTGCAACTATTTCTGATCCTGATTTATGGAAATCTTTATCATCTTTAGAGGAATTTGAGAAAAAATATCTAGAACTATCAAAGTGTGCTGCTGATAATTATTATCATGCATGGTGGAAGAGGCATGGAGTTGTTTTTGATGGCGAAATCGCATCTGTTTATTTCAAACATAAGAATTATGAACAGGCTGCAAGTTCATATGAGAAAGTTTGCGCTCTTTATTCTGGTGATGGATGGCAAGATTTGTTAGCAGACGTGCTTCCAAATCTAGCCGAATGCCAGAAAATACTTAATGATAAGCCTGGTTACTTATCATCATGTGTGAGATTACTTTCTTTGGATAAAAACTTGTTCTCGCTCAAAGAACGCCAAGCGTTTCAGTCAGAACTAGTTCAGCTTGCACACAGTGAAATGACTGACCCGGTCCCTTTAGACGTGTCATCATTGATAACATATTCAGGTAATTCGGGTCCACCCTTGGAGCTTTGTGACGGGGATCCGGGCACTTTGACTGTAAATTTATGGAGTGAGTTTCCTGATGATATCACTCTTGAATCACTTAGTCTTAGCTTGACAGCTACCGATAATGCTGATGAACGCGTTAAGGCAATCAAGAGCAGTGGTGTTACTATATTGAAAACGGGTCGAAACACAATTGCTCTTTCGTTCCCCCCACAGAAACCGGGCTCGTATGTGTTGGGTGTTCTTACAGGGCAGATTGGTCATTTAAGATTCAAGTCTCATGGTTTCTCCAAAGGTGGGCCTGCAGATAGACATCGTGATGATATGAGTTTTGATAAGCCTGCTAAGCCTATATTGAAGGTGTTCAAACCAAGGTCCCTTGTGGATCTATACGCAGCCGTTTCATCTGCACTATTAATGAACAAGCCTCAATGGATCGGGATAGTTATCAAGCCATTAAACTACTCTCTAAAGGATGCTCGTTTACATATTGACGCTGGGCCCGGGTTAAAGATTGAGGAGTCACGTGCAATTGAAATCGAGAAACATGTTGATAATGATCATAACAGTTCAAACTCTTCCGATACTCACACAGAAATTTCTAATATTAATCTTACAAATGGTAGTATAGAGTTACCAGAACGGGCCAGCAGTATAACTAGCGTCTTATGGATTCCTGTGTGCGCCATTAGCAATGAGCTACCAAGAGGAACACCTGCAGGCGCAATATCGACCCAAAGACCAAGCATTGTTAATGGGATGAGGACTTTAGCGCTGAAGCTAGAATTCGGAGTGTCACATAATCAGATACTGAAAAGGACTATACCTGTTCATTTTACTGACCCGTTCCACGTCAGCACACGGGTCACAGACCAGGGAAGTGATGGTTCTTTGTTTTTGCAGGTGATATTGCAGTCACAGGTGAAGGCCTTGTTAACTATACATGATGTTTGGTTAGATTTACAGGATGGATTTTCTCATGCTGGACGAGATGACGGGAGACCGACATCTGGCATGTTCCCATTGGTTGTTCCTCCAGCATCTAAATCTGGAATTTTGTTTGGTATATCACTTGGAACTGCAGCTACTCATGACGAAGAGAAAATGGTGCATAGTGATACAATAATAAATATAAAATATGAACTTTGTGGGGATAGAAATCATGGATCTCATACCCCTATCTCTCTAAAGACTGAAAGACCCGAAGACAATGACGTCGCACCATTTTTAACATTCAGAAGCGGTCTCATTTTACAACGACCAGTACAGGAACCTTTATTAGCAGTTGCTTTTCTTCCGTTACCTTCAAACGGTCTTACAGTTGGTCAGCTTGTCACATTCAAATGGAGACTTGAAAGGTTGACCAACATTGACTTAGAGGCCGAATTATTGTACGAAGTTAATGCGAATTCCAAGTATTGGATGTTTGCGGGAAGGAAACGAGGCCATGCTCCTCTCTCCTCAAAACAAGGTGCAAGAATTGAGATATCAATAATGTGTGTGCCACTAGCTGCTGGACATGTGCGTCCTCCACAACTCCACTTGCCAAATGTCAATAAGGCCCATATATGTTGCAATCCTGCAGGCCCACATTTAGTGTGTGTCCTGCCTCCACCTTTGAGCTCATCATTTTGCATTTCAGGATGA	3588	41.56	MAHLLAQFQSIKISCDGLVIAVKDVSDLWPLVKEKFEERLPFKRAILNNKNHNPVTVDNLQVEFLLTTDSRIKSRVPQDQQFFCFQEPYATVVLVACEDLEEFKTVLKPRLKLILQNEEEWFIVFVSKASSDKDPASKMEKKVYARLEIDFNSRKRERCCKYDLHDTVVTFWNDFELKIMECIRNTFDTRVQFYEDEILKLNEQRLTPVWSFCNFFILKESLAFMLEMANLHEDSLCAYDELESCYMETVKNADEKREFGGMEHGDDQSAMLSRNNKQLTHIVLETSFREFEFHQYIFACQAKLLFDLQRPFDVASRGFSFIVSFSEALARHESNLPFCMKEVWVLTSCLSLINATADHYRDGQVPSDVEREYYCIRAELYSLSRVKFMRLAYLIGFGSHIERSPLNSASLSMLPWPKPAVWPSVPSNASSEVLDKEKTIVQVSPRIKHFGIESKPLSLEPSSLLSDASHQKTESSVDTTRLAEVFVAAEHALRATISDPDLWKSLSSLEEFEKKYLELSKCAADNYYHAWWKRHGVVFDGEIASVYFKHKNYEQAASSYEKVCALYSGDGWQDLLADVLPNLAECQKILNDKPGYLSSCVRLLSLDKNLFSLKERQAFQSELVQLAHSEMTDPVPLDVSSLITYSGNSGPPLELCDGDPGTLTVNLWSEFPDDITLESLSLSLTATDNADERVKAIKSSGVTILKTGRNTIALSFPPQKPGSYVLGVLTGQIGHLRFKSHGFSKGGPADRHRDDMSFDKPAKPILKVFKPRSLVDLYAAVSSALLMNKPQWIGIVIKPLNYSLKDARLHIDAGPGLKIEESRAIEIEKHVDNDHNSSNSSDTHTEISNINLTNGSIELPERASSITSVLWIPVCAISNELPRGTPAGAISTQRPSIVNGMRTLALKLEFGVSHNQILKRTIPVHFTDPFHVSTRVTDQGSDGSLFLQVILQSQVKALLTIHDVWLDLQDGFSHAGRDDGRPTSGMFPLVVPPASKSGILFGISLGTAATHDEEKMVHSDTIINIKYELCGDRNHGSHTPISLKTERPEDNDVAPFLTFRSGLILQRPVQEPLLAVAFLPLPSNGLTVGQLVTFKWRLERLTNIDLEAELLYEVNANSKYWMFAGRKRGHAPLSSKQGARIEISIMCVPLAAGHVRPPQLHLPNVNKAHICCNPAGPHLVCVLPPPLSSSFCISG	1195

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr02g06787	1195	SUPERFAMILY	TPR-like	543	623	IPR011990	GO:0005515(InterPro)
	Amtr02g06787	1195	Pfam	Trafficking protein particle complex subunit 10, TRAPPC10	1094	1165	IPR022233	-
	Amtr02g06787	1195	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	9	1193	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(PANTHER)\|GO:1990071(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr02g06787	K20307	trafficking protein particle complex subunit 10

Event-related genes

Select	Gene_1	Gene_2	Event_name
	11559	Amtr02g06787	Amtr07g01356

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr2:123110578	Amtr07g01356	Amtr-Chr7:18635822	wgd