Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g06924 | ATGGGTACGGTTCGATCCGAATCCCTCATGCGTTGGGTCTGGGAAGCTAACCGTGGAAACCCCGTTCGCGAAAACGCCACCCTCACATTCGGGACAGACGGCAACCTAGTCCTCGCGGATGCTGACGGACGTGTTGTCTGGCAAACGAATACCGCGAACAAAGTGGTCGGGTTTCAAGTGCTTCCAACTGGTAACATGGTTCTTCATGATGGTAAGGGTAATTACTTATGGCAAAGCTTTGATTCTCCTACGGACACTCTCTTGGTGGGTCAAACACTACGAGCTGGTGGTCCGAATAAGCTCGTGAGTCGGCTTTCGGAGGTGAGCAATGTTGATGGACCGTATAGTTTGGTTATGGAACCTAAAGGGTTATCCATGTATTACAAAAGTCCTAACTCGCCTCGACCAATGCTTTACTGGTCCTCTAGCGAATGGTTCACCATTGACCGAGGTAGTTTGAGTAATTTAACTCTTGTCTCGTCCCCAGATACGGATGAGGGGTTTCTATATTACTTGACGTTTGAATACTTTACCACAAACCCTACGTCATCGTCGAATCGCAACATGGCGTTTTCAAGATACAACAACACGCTATCGTATCTTCGATTAGGGATAGATGGAAACCTTAAGTTCTACACATATAACCCGAACGTGCAAGGTGTGGCGTGGGAGTTGGTGTACACCTTTCTCGATCGGGATTCAATGGAAGGTGAGTGCCAGTTACCGGGACGATGTGGGAACTTTGGGTTATGTGAGGACAGCCAATGTGTCGCGTGCCCGACGCCTAATGGGCTAACTGGGTGGAGCAAAGAGTGCGAGGTGAAAAAGGTGACATCTTGCAAAGCTAGCGACTTTGGGTACTACAAGCTTGAAGGGGTTGATCATTTTATGATCAAGTACACGAGGGGAGATCAGACCAAACAAAGCGATTGCGAGAGCAAATGCACGAAGGATTGCAAGTGTATGGGGTACTTCTATCACACGGATAATTCGAGGTGTTGGATCGCTTACGATTTGAAAACGTTAACAAGAGTTGGGAACTCGACTCATTTGGCGTACATTAAAACACCCAACAAGTAG | 1080 | 47.69 | MGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKVVGFQVLPTGNMVLHDGKGNYLWQSFDSPTDTLLVGQTLRAGGPNKLVSRLSEVSNVDGPYSLVMEPKGLSMYYKSPNSPRPMLYWSSSEWFTIDRGSLSNLTLVSSPDTDEGFLYYLTFEYFTTNPTSSSNRNMAFSRYNNTLSYLRLGIDGNLKFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGNFGLCEDSQCVACPTPNGLTGWSKECEVKKVTSCKASDFGYYKLEGVDHFMIKYTRGDQTKQSDCESKCTKDCKCMGYFYHTDNSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g06924 | 359 | CDD | B-lectin | 1 | 83 | IPR001480 | - | |
| Amtr02g06924 | 359 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 11 | 357 | IPR051343 | - | |
| Amtr02g06924 | 359 | SMART | blect-4 | 1 | 83 | IPR001480 | - | |
| Amtr02g06924 | 359 | Pfam | D-mannose binding lectin | 13 | 94 | IPR001480 | - | |
| Amtr02g06924 | 359 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 81 | IPR001480 | - | |
| Amtr02g06924 | 359 | Gene3D | - | 3 | 81 | IPR036426 | - | |
| Amtr02g06924 | 359 | CDD | PAN-AP-plant | 279 | 357 | - | - | |
| Amtr02g06924 | 359 | Pfam | S-locus glycoprotein domain | 158 | 264 | IPR000858 | GO:0048544(InterPro) | |
| Amtr02g06924 | 359 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 8 | 145 | IPR036426 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g06924 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:126128555 | Amtr02g06935 | Amtr-Chr2:126328637 | dispersed | |
| Amtr | Amtr-Chr2:126128555 | Amtr02g06925 | Amtr-Chr2:126149580 | tandem | |
| Amtr | Amtr-Chr2:126128555 | Amtr09g03468 | Amtr-Chr9:87864549 | wgd | |
| Amtr | Amtr-Chr2:126128555 | Amtr09g03435 | Amtr-Chr9:87363257 | wgd |