Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g06952 | ATGGGTTGCTCCGGTTCATCACTGAGTAAGCGAGAGCGAACGACGAAAAAGTTAAGAAAGCCGAAGCCGTGGGAGTTCCCACGGCCTGTTACGTGGAGTCAGTTGGTTCAGATGCGGGATGAGTTTTGGGATTCGGCTCCTCACCATGGTGGCAAGAAAGAAATATGGGATGCAATACATGCAGCAGCTGAAGCTAATATAGAACTTGCTCAAACAATATTAGATAGTGCAGGGGTCATTGTTCATAAGCCTGATATGACAGTTTGTTATGATGAAACAGGTACCAAATATAAAATACCAAGATATGTATTAAGTGAGCCAACAAACTTGATACAACTAAGTTGA | 345 | 42.9 | MGCSGSSLSKRERTTKKLRKPKPWEFPRPVTWSQLVQMRDEFWDSAPHHGGKKEIWDAIHAAAEANIELAQTILDSAGVIVHKPDMTVCYDETGTKYKIPRYVLSEPTNLIQLS | 114 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g06952 | 114 | Pfam | Ubiquitin-binding domain | 15 | 112 | IPR032752 | - | |
| Amtr02g06952 | 114 | PANTHER | UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED | 1 | 111 | IPR039869 | - | |
| Amtr02g06952 | 114 | Gene3D | - | 31 | 104 | IPR038169 | - | |
| Amtr02g06952 | 114 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g06952 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 359024 | Amtr02g04096 | Amtr02g06952 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:81571408 | Amtr02g06952 | Amtr-Chr2:126811002 | dispersed | |
| Amtr | Amtr-Chr2:126811002 | Amtr05g01410 | Amtr-Chr5:23834586 | dispersed |