AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g07036 ATGGCGGCACCAAGGAATATGGTGGTGGAGACTACAAAGTTGATGAAGGATGAAGAGACTGCTGAAGATTCACCTACCAGTAAGAAGCCTGCAGGTGCTAAACTCGACGGCAGGTATCCGTTGACCGGATGGGAGTTTACGGTGGCCTTGAGTGTTTTTGTGGTCTTTACTATTGGATTGTTTTGTATTTATCTTACTATGCCTGCTGCTGAGTATGGGAAGCTTAAATTGCCTCGGTCGATATCCGATTTGAGAATGCTTAAAGACGACCTTGGAACGTATGCAAGTATTTACCCAACGAAGTTCATTCTTGGTTACTGTTCGACTTACATATTCATGCAAACATTTATGATTCCGGGAACCATTTTCATGTCGTTGCTCGCTGGAGCTCTTTTTGGTGTGAAAGGTATCTTCTTGGTTGTGTTCAATGCCACGGCCGGTGCATCATCTTGCTTTTTCCTGTCAAAGTTAATTGGAAGGCCCTTGGTTTTGTGGTTGTGGCCAGAAAAGTTGAAATTGTTTCAGGCAGAGATAGCAAAGCGCGGTGACAAACTGCTAAACTATATGCTCTTTTTGAGGATAACTCCAACTCTACCAAATCTTTTCATTAATTTGGCATCTCCAATTGTGGATATACCATTCCATGTGTTCTTTTTGGCTACAGTTGTTGGCCTCATTCCAGCCTCTTATATAACTGTGAGGGCTGGGCTTGCTCTTGGAGAGCTGAACTCCATTAAAGATCTATACGATTTGAAGACGTTAACTGTACTTTTTCTCATTGGATCCATCTCCATATTGCCAACGGTGCTGAAGAGAAAACGGGTATATGAATAA 834 42.57 MAAPRNMVVETTKLMKDEETAEDSPTSKKPAGAKLDGRYPLTGWEFTVALSVFVVFTIGLFCIYLTMPAAEYGKLKLPRSISDLRMLKDDLGTYASIYPTKFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVKGIFLVVFNATAGASSCFFLSKLIGRPLVLWLWPEKLKLFQAEIAKRGDKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATVVGLIPASYITVRAGLALGELNSIKDLYDLKTLTVLFLIGSISILPTVLKRKRVYE 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g07036 277 Pfam VTT domain 118 236 IPR032816 -
Amtr02g07036 277 PANTHER - 21 276 IPR045014 GO:0005783(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g07036 K27310 transmembrane protein 41
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr2:128883413 Amtr08g01305 Amtr-Chr8:28369162 dispersed
Amtr Amtr-Chr2:128883413 Amtr07g02127 Amtr-Chr7:29703974 transposed