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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g08766 ATGGAATCCTCAACCATTCTTCCATCATCTCACCTTTCTATTTTATGTCAGAAACCCCTTGGAACCACCATAGGAGCTCTCCCTTTTAGTTTTAAACAATGGAAGACAACATCTAACATCACTCTTACAAATTGTCAAAAGATGCATGTTTCAGGATTTGGAGAAGCATCGCCAGAAACCAAAGCAGCGAAAAATCTTCACAATTTCTTTACATATGTTGCAGTCAGGGTTGTCATTGCCCAGCTTGCGGACACCACTCCTGAGGCACACAGGGATTTGATGGAGTTTGTGGATAGACACTCTTTGAACGATGGTGACAAATTTTGTGCAGCGTTAATGCGTGAATCACCAAATCATAAAACCCTAGCTATGAGAATATTGGAGGTTCGATCTGCGTACTGCAACAGAGATTTTGAATGGGACAACTTAGAACGATTAGCTAAAAAGATGGCTGATGAAGCGAACACAAAAATTATGAGGGATTACTTGTTGGAAACAAGTCAGGTAGATAATGAAAAATGA 522 40.04 MESSTILPSSHLSILCQKPLGTTIGALPFSFKQWKTTSNITLTNCQKMHVSGFGEASPETKAAKNLHNFFTYVAVRVVIAQLADTTPEAHRDLMEFVDRHSLNDGDKFCAALMRESPNHKTLAMRILEVRSAYCNRDFEWDNLERLAKKMADEANTKIMRDYLLETSQVDNEK 173
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g08766 173 SUPERFAMILY RbcX-like 55 171 IPR038052 -
Amtr02g08766 173 PANTHER CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC 35 170 IPR003435 GO:0044183(InterPro)|GO:0110102(InterPro)
Amtr02g08766 173 Pfam RbcX protein 61 167 IPR003435 GO:0044183(InterPro)|GO:0110102(InterPro)
Amtr02g08766 173 Gene3D - 48 173 IPR038052 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g08766 K27935 RuBisCO chaperone RbcX