Gene detail

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Gene ID

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr02g08786	ATGGATTCCTCAACCCTAGAGTCCCAACCCACCTCCATCACACATGAATCCCCCTTCACCCTCTTCTCCATGGCCATCTCCCACTCCCACATAGCCTTAGGCACCTTCCTTGAAGACTACACCAATCACATTAACATCCTTAACCTTAACCGTAACCATAACCATAACTCCCTCTCCTTATCCCCTTTCCTTTCCTTCCCCCATCCTTACCCCCCTACCAAACTCATGTTTCACCCTTCCCCCCTTAACCCTTCTCTCTTAGCCTCATCCTCAGACTTCCTCCGCCTCTACCAAATTAATAATAATAATAATAATAATCACTTTACCAATAATAACAATAATAATAATAATATTACTTCGCTTGAACCTGTATCTATTCTTAACAATAGTAAAAGTAGTGAGTTCTGTGCCCCGTTGACTTCCTTTGACTGGAACGAACTCGAACCAAGGCGAATCGGTACGTCATCGATTGATACGACGTGTACGATATGGGATGTGGAGAAAGGTGTTGTGGAGACTCAATTAATAGCTCATGATAAGGAGGTTCATGATATTGCTTGGGGGGAAGCCGGTGTTTTCGCTTCGGTTTCGGCTGATGGGTCGGTTAGAGTGTTTGATTTGCGCGATAAGGAGCATTCGACGATTATTTACGAAAGTCCTCAGCCCGATACGCCGTTGTTGAGACTGGCGTGGAATAAGAGGGATTTGAGGTATATGGCGACGATTTTGATGGATAGTAATAAGATTGTGGTGCTTGATATTCGGTCGCCTACGTTGCCTGTGGCGGAGTTGGAGAGGCATAGAGGGAGTGTGAATGCGATTGCGTGGGCGCCGGTTAGTGGGCAGCATATTTGTTCGGGTGGGGATGATTCGCAGGCGCTTATTTGGGATTTGAGTGATGTGGCGGGAGGGAATGGGATTGATCCGGTTTGTATGTATTCGGCTGGAGCTGAGATTAATCAGGTGCAGTGGTCGGCTGCTATGCCGGATTGGATTGGGATTGCAGTTGGGAACAAGATGCAGCTTCTGAAAGTTTGA	1038	46.63	MDSSTLESQPTSITHESPFTLFSMAISHSHIALGTFLEDYTNHINILNLNRNHNHNSLSLSPFLSFPHPYPPTKLMFHPSPLNPSLLASSSDFLRLYQINNNNNNNHFTNNNNNNNNITSLEPVSILNNSKSSEFCAPLTSFDWNELEPRRIGTSSIDTTCTIWDVEKGVVETQLIAHDKEVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIIYESPQPDTPLLRLAWNKRDLRYMATILMDSNKIVVLDIRSPTLPVAELERHRGSVNAIAWAPVSGQHICSGGDDSQALIWDLSDVAGGNGIDPVCMYSAGAEINQVQWSAAMPDWIGIAVGNKMQLLKV	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr02g08786	345	SMART	WD40-4	59	98	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	SMART	WD40-4	120	165	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	SMART	WD40-4	168	206	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	SMART	WD40-4	257	297	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	Gene3D	-	5	342	IPR015943	GO:0005515(InterPro)
	Amtr02g08786	345	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	264	299	-	-
	Amtr02g08786	345	PANTHER	WD REPEAT CONTAINING PROTEIN	4	345	IPR045159	GO:0005634(PANTHER)
	Amtr02g08786	345	ProSiteProfiles	Trp-Asp (WD) repeats profile.	175	215	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	ProSitePatterns	Trp-Asp (WD) repeats signature.	284	298	IPR019775	-
	Amtr02g08786	345	ProSiteProfiles	Trp-Asp (WD) repeats profile.	264	299	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	Pfam	WD domain, G-beta repeat	260	297	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	Pfam	WD domain, G-beta repeat	173	206	IPR001680	GO:0005515(InterPro)
	Amtr02g08786	345	SUPERFAMILY	WD40 repeat-like	20	299	IPR036322	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr02g08786	K11805	DDB1- and CUL4-associated factor 7

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr2:171000567	Amtr05g02947	Amtr-Chr5:54218023	dispersed