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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g08991 ATGGCGGCAGGCGTGGTAGCTAGGTCCTTCCTCCGTTCCTCCACCGCCGTGAGAGCATCAGCTTCTAGAATCTCCCCCACTGTTATTATTATTAAACCACGCTCTCCCTTCTGCATCCGCCCTCAAAAACCTCTTTCTCATCGCATTTTCAGGTCACCTGTAGAGATGAGTTGTGTTACTGTGGAATCATTCTTTCCCTTCCACACCGCCACCGCTTCTGCATTGCTGAATTCAATGCTTTCCACTGCTCCTTGTACATGTGGTTGGCTCATTGATGATTCTTAG 285 49.12 MAAGVVARSFLRSSTAVRASASRISPTVIIIKPRSPFCIRPQKPLSHRIFRSPVEMSCVTVESFFPFHTATASALLNSMLSTAPCTCGWLIDDS 94
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g08991 94 PANTHER OS02G0230000 PROTEIN 1 90 IPR043459 GO:0005739(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g08991 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr2:175551767 Amtr10g02730 Amtr-Chr10:57507390 dispersed
Amtr Amtr-Chr2:175551767 Amtr10g01387 Amtr-Chr10:24710426 transposed