AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr02g09044 ATGAGAGAAGCTAAATCCTTGAGGAATCTATGGAAAAGACATCTCCATTTTGATTGGGGACGATATGGAATGAAGATGAGACCGTTCATGGGAGTTACATTTATCATAATGCTGTATATTGTGTATAGAACCACAAACTATCAGTATCTCCAAACAGAGTTGGACTCAAGATTTGATCCGCTTTATTCATTAAAGGATTATGCAATAACATCTACAAGTTTAAAAGGTTTACCTCGTGGTATTATTGAAGCTAAATCTGACTTGGAGTTAAAGCCTTTATGGCCAACAAGTAGTTCAAAATCGAAGGGTGATGTTTCCAGTACACATAATTTGCTGGCTGTTCCTGTGGGCCTCAAACAAAAGCGTAATGTTAATACCATTGTTCAAAAGTTTCTCAAAGACAATTTTACAGTTATCTTATTCCATTATGATGGAAAGGTCGATGGCTGGCGTGATCTTAGTTGGCATGACAAGGTCATACATATTGTAGCTCAGAACCAAACAAAGTGGTGGTTTGCAAAGAGATTTCTGCATCCTTCTGCTGTGTCTATTTATGATTATATATTTCTCTGGGACGAAGACCTAGGAGTGCAGCATTTTAATCCCAGAAGGTATTTGAATATTGTTAAAGCCGAAGGATTCGAAATATCACAGCCAGCTTTAGATCCAAATTCAACTGACATACATCATCGGATCACAATCCGAAAGAGAACGAATAAGTTTCATAGGAGAGTGTATGATAGCAGAGGCAGTGTGAAATGTTCAGATGATAGTGAGGGTCCACCATGTTCTGGATTTGTAGAAGGAATGGCCCCAGTTTTCTCAAGAGCTGCGTGGCATTGTGCTTGGCATCTTATTCAGAATGACCTTGTTCATGGATGGGGAATGGATATGAAACTTGGCTATTGTGCACAGGGGGACCGGTCGAAGAAGGTTGGAGTTGTTGATAGTGAATTTATAGTGCATCAAGGAATACAAACATTAGGCGGGACTTCTGCTAAAAAGACCTCTGATCATGTGGATTTGTCAAAGAAACATGTTGTTGATGTTCGAGCTGAGATAAGGAGACAATCAACAACTGAGCTTCAAATATTCAGAAAACGATGGGAAAAAGCCGTGAAAGAGGACACGTGGTGGGTGGATCCTTTCTACAGACGAAAACAAATACAAGCCTGGGGTTCATGA 1185 39.75 MREAKSLRNLWKRHLHFDWGRYGMKMRPFMGVTFIIMLYIVYRTTNYQYLQTELDSRFDPLYSLKDYAITSTSLKGLPRGIIEAKSDLELKPLWPTSSSKSKGDVSSTHNLLAVPVGLKQKRNVNTIVQKFLKDNFTVILFHYDGKVDGWRDLSWHDKVIHIVAQNQTKWWFAKRFLHPSAVSIYDYIFLWDEDLGVQHFNPRRYLNIVKAEGFEISQPALDPNSTDIHHRITIRKRTNKFHRRVYDSRGSVKCSDDSEGPPCSGFVEGMAPVFSRAAWHCAWHLIQNDLVHGWGMDMKLGYCAQGDRSKKVGVVDSEFIVHQGIQTLGGTSAKKTSDHVDLSKKHVVDVRAEIRRQSTTELQIFRKRWEKAVKEDTWWVDPFYRRKQIQAWGS 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr02g09044 394 PANTHER OS06G0731900 PROTEIN 33 378 IPR007877 -
Amtr02g09044 394 Pfam Protein of unknown function (DUF707) 73 375 IPR007877 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr02g09044 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr2:176963080 Amtr10g01504 Amtr-Chr10:27159270 dispersed
Amtr Amtr-Chr2:176963080 Amtr04g02736 Amtr-Chr4:53623939 wgd