Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr02g09130 | ATGGCATCAATGGCCGGGTTACGTGGTTCCTCTCTAGCAGTCTTGGAAGGAAGTCTTCAGCTCAATGGCTCAACCCGTTTGACGCCTATTGGAAATGGTCGTGTTGGTGTTGCACGGACTGGGCTAGTTGTTAAAGCCCAACAGGGACAAGGCGAAAGCGAGACTAGCCGCAGAGCTGTGTTGGGACTCATTGCCACTGGACTAGCCTCGGGTTCTTTCGTTCAGGCTGTGCTTGCTGATGCTAAGCCTATCAAGCTCGGACCACCTCCCCCACCCTCTGGTGGTCTTCCCGGAACCCTAAACTCCGATGAAGCAAGGGACCTTGATTTGCCGTTAAAGAACCGGTTCTACCTCCAGCCATTGTCGCCATCGGAGGCTGCAGCTCGTGCAAAAGAATCAGCAAAAGAGATATTAAATGTTAAAGAGTTCATTGACAAAAAGGCATGGCCATATGTCCAGAACGACCTTCGTTTGAGGTCGGAATACCTTCGGTTCGACCTGAATACAGTCATTGCCGCTAAGCCAAAGGATGAGAAGAAACAACTCAAAGATCTTACCGGAAAGCTTTTCCAAAACATGGCAGATCTGGACTATGCGGCAAAGATCAAAAGCTCGGCTGATGCAGAGAAGAGTTACGCTGCAGCTGTGTCTAGTCTTAATGATGTTCTTTCGAAACTCGGCTAA | 684 | 49.56 | MASMAGLRGSSLAVLEGSLQLNGSTRLTPIGNGRVGVARTGLVVKAQQGQGESETSRRAVLGLIATGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDEARDLDLPLKNRFYLQPLSPSEAAARAKESAKEILNVKEFIDKKAWPYVQNDLRLRSEYLRFDLNTVIAAKPKDEKKQLKDLTGKLFQNMADLDYAAKIKSSADAEKSYAAAVSSLNDVLSKLG | 227 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr02g09130 | 227 | FunFam | Oxygen-evolving enhancer protein 3 | 80 | 227 | - | - | |
| Amtr02g09130 | 227 | Pfam | Oxygen evolving enhancer protein 3 | 1 | 227 | IPR008797 | GO:0005509(InterPro)|GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0019898(InterPro) | |
| Amtr02g09130 | 227 | Gene3D | - | 80 | 227 | IPR023222 | - | |
| Amtr02g09130 | 227 | MobiDBLite | consensus disorder prediction | 84 | 104 | - | - | |
| Amtr02g09130 | 227 | PANTHER | OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC | 40 | 226 | IPR054099 | GO:0009507(PANTHER)|GO:0009767(PANTHER)|GO:0045156(PANTHER) | |
| Amtr02g09130 | 227 | SUPERFAMILY | Oxygen-evolving enhancer protein 3, | 116 | 226 | IPR023222 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr02g09130 | K08901 | photosystem II oxygen-evolving enhancer protein 3 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:180994659 | Amtr07g06098 | Amtr-Chr7:128089353 | dispersed |