Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr06g04266	ATGGGGAATGTAAATCAAATTCCCCAACAACATTCAGAAACCACACAAGAACTTGAAGATCAAGACTCATCATCTATGACGTTCACTTGTGAAATTTGCATCGAACCGGTAACACTTCCTAACACAAAATTCATGAACACTAACATATGCACTCACCCCTTTTGCACCGATTGCATGATCAAGTACATCCAAGTGAAGCTCGAAGACAACGTATCCGACATCAAATGCCCATCTCTCAGCTGTGATCATTCTCTCGAACCATTGTCATGCCGCCCCAAAATTCCACACCAACTCTTTGATAAATGGTGTGATATGTGCTTTGTGATTCGGCGGTTCTAG	339	42.18	MGNVNQIPQQHSETTQELEDQDSSSMTFTCEICIEPVTLPNTKFMNTNICTHPFCTDCMIKYIQVKLEDNVSDIKCPSLSCDHSLEPLSCRPKIPHQLFDKWCDMCFVIRRF	112

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr06g04266	112	FunFam	RBR-type E3 ubiquitin transferase	25	108	-	-
	Amtr06g04266	112	PANTHER	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	15	105	IPR031127	GO:0000151(PANTHER)\|GO:0000209(PANTHER)\|GO:0004842(InterPro)\|GO:0005737(PANTHER)\|GO:0006511(PANTHER)\|GO:0016567(InterPro)\|GO:0031624(PANTHER)\|GO:0032436(PANTHER)\|GO:0061630(PANTHER)
	Amtr06g04266	112	ProSitePatterns	Zinc finger RING-type signature.	50	59	IPR017907	-
	Amtr06g04266	112	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	23	109	IPR013083	-
	Amtr06g04266	112	MobiDBLite	consensus disorder prediction	1	23	-	-
	Amtr06g04266	112	ProSiteProfiles	Zinc finger RING-type profile.	30	77	IPR001841	-
	Amtr06g04266	112	SUPERFAMILY	RING-U-box	27	105	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr06g04266	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr6:93983968	Amtr10g04050	Amtr-Chr10:93970716	dispersed
	Amtr	Amtr-Chr6:93957126	Amtr06g04266	Amtr-Chr6:93983968	tandem