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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr06g04282 ATGGCTTACAAGCCTTATTTCCTAACTCTTCTCATTGTAGCCTCACTTGTATCATCATCATTTGCAGCCCGTTGCGGTTCCTCCATTCCAATGGCGAAACTTAGTACAACTGATCAAAATCAGGAATCTTTATATTTAGAAGATGATCAAATTTTGGAGAGGGATGATATTATTCACGAGAGGCTGCTAAAGGCTAATACAAAAGATTATGGACGATCGGATCCTGCACCGACGTTTGTTAAGCCTCCGTTTAAACTCATACCGAACTAG 270 40.37 MAYKPYFLTLLIVASLVSSSFAARCGSSIPMAKLSTTDQNQESLYLEDDQILERDDIIHERLLKANTKDYGRSDPAPTFVKPPFKLIPN 89
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr06g04282 89 PANTHER PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED 4 89 IPR038974 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr06g04282 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
358176 Amtr01g04301 Amtr06g04282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr1:115992101 Amtr06g04282 Amtr-Chr6:94603820 wgd