AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr06g04363 ATGTCGATTCTAGGTTCAAATGTGCCCAGCGAGGTTGGTCTGAAGTTGCTTCTTTGCCCACTTGGTTCCAATATTGTCCTAAAAACAGCATGCTGTTCTGTAGGAGTTATTTTACCCGTTTATTCTACTTTTAAAGCAATTGAGACAAATAACAGAACTGAGCAACAAAAGTTGCTTTTATACTGGGCAGCATATGGGACATTTAGCATTGCAGAAACATTTGCAGACAAAATTATATCCTGGTTTCCTCTTTACCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAGCTTCCCGCTACAAATGGTGCAAAACTTTTATACATGAATCATTTGCGTCCGTTCCTTTTGAAGCATCAAGCTAACCTTGATCAAATTGTGGCGTTATTGTACAGTGAAACGAATAAATTTGTGAGTGCGCACCAAGGAGAATTTGTGTTTGTGAAAGCAATTGTTATGAAGATTTTGATATCAGCAAAGCATTTGGTCAACGATAGCAGTCAACCCAACCCGCCAGTCCCACCACCAGAGGGAAGAGCAGTCACAGGCGTAAATGAACAAGCGGAGAGCACTGCGTCTAATGACAATGATCACGATGATGGCAATGATAATAATGATGACGACGATGATGGTTATGTAACTGTCCCTGCAAGTTAA 657 40.49 MSILGSNVPSEVGLKLLLCPLGSNIVLKTACCSVGVILPVYSTFKAIETNNRTEQQKLLLYWAAYGTFSIAETFADKIISWFPLYHHMKFAFLVWLQLPATNGAKLLYMNHLRPFLLKHQANLDQIVALLYSETNKFVSAHQGEFVFVKAIVMKILISAKHLVNDSSQPNPPVPPPEGRAVTGVNEQAESTASNDNDHDDGNDNNDDDDDGYVTVPAS 218
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr06g04363 218 PANTHER HVA22-LIKE PROTEINS 35 138 IPR004345 -
Amtr06g04363 218 MobiDBLite consensus disorder prediction 165 218 - -
Amtr06g04363 218 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr06g04363 K17279 receptor expression-enhancing protein 5/6
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
12999 Amtr06g04363 Amtr07g01048
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr6:96850578 Amtr07g01048 Amtr-Chr7:14412327 dispersed