AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr06g04390 ATGGCAGCAAAGAAAATCATGTTTCCACTACTGATGATGGCGATGCTGACCGCCGCGGTTTATGCTCTAGACACCAATACTGTGTTTGATCCATGTTCGGATACAAAAGTTCAGAGATGGGATGGTTTTACATTTGGACTCGCGTTTTCTTCTAAAAATTCGTTCTTTTCCAACCAAATTCAGCTTTCGCCCTGCGATAGCCGCCTCTCCCTACAGGGAACCGCGGCTAGACTCGCTGTTTTTCGGCCGAATGTAGATGAGCTCACTTTTCTTACTGTCAATACGTCTGATTTTAATCTGGCGAAATCTGGTGGATATATGGTTGCATTTGCTGGAAGACAATATGCTGCAAGATCTATACCTGCTTTTGTTGTTGATGAATCCAATATTATTACAAGTTTCACTCTGGTTCTTGAATTCGATGAAGGAAGACTTGTCAACTTATATTGGAAGAAATTTGGGTGTGACTCATGCACGAAGAGTTCTAGGATTTGCCTCGAAGATCAAGAATCATGTGCGACACCAATCTCAAAATGTGAGACTAATGGTGGATCGGTTGACTGCAATCTTAGCGTGCAATTAGCGTTTTCGGGTACAGACAAGATGCTAAAAGTTCTTAATTCATGGTACGAAATTGAAAACCTAAGGCAATATTCGCTAGTTGGGTTGTATGAAAACTTATAA 684 41.23 MAAKKIMFPLLMMAMLTAAVYALDTNTVFDPCSDTKVQRWDGFTFGLAFSSKNSFFSNQIQLSPCDSRLSLQGTAARLAVFRPNVDELTFLTVNTSDFNLAKSGGYMVAFAGRQYAARSIPAFVVDESNIITSFTLVLEFDEGRLVNLYWKKFGCDSCTKSSRICLEDQESCATPISKCETNGGSVDCNLSVQLAFSGTDKMLKVLNSWYEIENLRQYSLVGLYENL 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr06g04390 227 PANTHER DPH3 HOMOLOG-RELATED 13 226 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr06g04390 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr5:34316673 Amtr06g04390 Amtr-Chr6:97384287 dispersed
Amtr Amtr-Chr6:97384287 Amtr05g01921 Amtr-Chr5:34276912 transposed