Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr06g04391 | ATGTGGATGAACGTTCCAACAGCAATTCTCCTGGTATCAGGAGTTCATATTATAATAACCGAAGTGGAAATCCGTTGGAAGATCAGGAAACCTAACAGACAATCATACTTGGAACATCTAGAGCGAAAACAAATGTCTGTGAATGATTCTCGTCTTACCACGTTGCCTCCCCAACCTAAATGGAAGAAGAAGATTGATTCTCCGGTAGTTGAGGCTGCAATGGAGGATTTCGTTAATAAGCTTTTGCATGAATTTGTGGTTGATTCGTGGTATTCGGCTTTAACACCTGATAAAGAAGCACCACAGCTTCTACATTCAGTTATTATGGAGGTTCTTGCTGAAATCTCTGCAAGAGTCAAAGACATAAACCTTGTTGACTTGCTAACTAGGGATGTAGTTGATTTAGTAGGGGAACACTTAGAGGTTTTCAGAAAAATGCAAGCGGCAATTGGGAGGGAGGTTATGGTGACATTATCTTCTGACGAACGAGATGAAAGATTAAAACACCATCTAATGGCTTCTAAGGAGCTCCATCCAGCTTTAATATCTTCAGAGAGTGAGTACAAGTTTCTTAAACGAATTATAGGGGCGCTTTTGACAGCAGTTCTTAGACCACGAGAAGCGCAGTGCCCTGTAGTTCGGTGCATTGCACGTGAGCTTTTAACATGTTTGGTAGTCGAACCAGTAATGCGATTTGCATGCCCTGGGCGTATCAATGAGTTGATTGAGGCTATTTTTCTAGCCAACAATAATATAAAAGGGAAAGATGCAGGTGGTAATCAGTCAACTAATGTAATGGGTCAAAGTCAAACCCCGAATCAGGAAAAAAGTCAAGATTTGGGTTGCATTAAAGATGGGTCTTCTAGCAGTCAAAAGAATGATACATCTAAAGTCCAAAAGGAAACGGTTTTAAACCCATCTGGGCCCATGGCTTGTGGTCCGGTTCAAGATGAACCGTTGAACCCACCGACATCTGCTTGGGCCCGGGGTCTTGAGGCTGCAACCCAAAGGAGAACAGAAGTCCTTCATCCTGAAAATCTTGAAAATATGTGGACCAAAGGAAGAAACTACAAAAAGACATCTCATAAGAAAATAGAAGGCTCCGGCATAAATGAAAATAATAATGATCAAACACTAGAGCAAAATCTTGATGGAGTTTTGAGTGACCAAAGCAAGACATCTGATCCTTCAGATTTAGCTAATGAAAATACCTATAATGTTCATGGAAGTAAATCTATTATGGAAAGATCAAATAGTGTTTCTGACTTGAACATTCAAAATCAAGTTGGTGGAAATGCGAATGTTGGGGGAGATAATGATGTAAATAGTGTTGATATTGTTTCGGATAAAGTGACACGTACTGAAGGGTTCGTTCCAAAGCTCAGGTGTCGGGTTTTAGGAGCATACTATGAAAATATTGACTCAAAATCATTTGCAGTTTATTCGATTGCGGTTACAGATGCTGATAACAAGACTTGGTTGGTGAAAAGAAGGTATTGA | 1500 | 40.13 | MWMNVPTAILLVSGVHIIITEVEIRWKIRKPNRQSYLEHLERKQMSVNDSRLTTLPPQPKWKKKIDSPVVEAAMEDFVNKLLHEFVVDSWYSALTPDKEAPQLLHSVIMEVLAEISARVKDINLVDLLTRDVVDLVGEHLEVFRKMQAAIGREVMVTLSSDERDERLKHHLMASKELHPALISSESEYKFLKRIIGALLTAVLRPREAQCPVVRCIARELLTCLVVEPVMRFACPGRINELIEAIFLANNNIKGKDAGGNQSTNVMGQSQTPNQEKSQDLGCIKDGSSSSQKNDTSKVQKETVLNPSGPMACGPVQDEPLNPPTSAWARGLEAATQRRTEVLHPENLENMWTKGRNYKKTSHKKIEGSGINENNNDQTLEQNLDGVLSDQSKTSDPSDLANENTYNVHGSKSIMERSNSVSDLNIQNQVGGNANVGGDNDVNSVDIVSDKVTRTEGFVPKLRCRVLGAYYENIDSKSFAVYSIAVTDADNKTWLVKRRY | 499 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr06g04391 | 499 | MobiDBLite | consensus disorder prediction | 258 | 303 | - | - | |
| Amtr06g04391 | 499 | Pfam | PXA domain | 67 | 244 | IPR003114 | - | |
| Amtr06g04391 | 499 | SMART | PXA-3 | 67 | 250 | IPR003114 | - | |
| Amtr06g04391 | 499 | PANTHER | PX SERINE-THREONINE KINASE PXK | 1 | 499 | IPR051837 | - | |
| Amtr06g04391 | 499 | ProSiteProfiles | PXA domain profile. | 67 | 250 | IPR003114 | - | |
| Amtr06g04391 | 499 | MobiDBLite | consensus disorder prediction | 258 | 320 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr06g04391 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 11106 | Amtr02g02868 | Amtr06g04391 | |
| 358185 | Amtr01g04347 | Amtr06g04391 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr2:105828436 | Amtr06g04391 | Amtr-Chr6:97392730 | dispersed | |
| Amtr | Amtr-Chr6:97392730 | Amtr08g01672 | Amtr-Chr8:38709402 | dispersed | |
| Amtr | Amtr-Chr1:117320317 | Amtr06g04391 | Amtr-Chr6:97392730 | wgd | |
| Amtr | Amtr-Chr2:63477643 | Amtr06g04391 | Amtr-Chr6:97392730 | wgd |