AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr06g04410 ATGGAGATACAAATCATGACACCCTCACCACCAACAAGCACCAACGCCACGCCTTACACCACCGCACCTTCCTCCCCTCACCGCCTCCCCAACTTCTTCTACAGCGCCCCCACCAGCCCCATCCACTCACTCGTCTCCTTCCATCAACACACCGACACCGATACCGACACCGATTTCGCCTTTGATTTCACTACTAATAACCCCCCTCAACCACCCTCCCTCTCAGCCGCCGACGAACTCTTCCATGGTGGCATAATCAAACCCCTTAAACCTATTCCTAACGGCCCAATTCAAAGCAACAACCAGATAATTTCACGAACCACTGATAACGATGATCAAGATCATTTCACTAAGATGTTTACACAACCACCTAGTGATGATGATGATGATGATCAAGATTACTTCATTAAAGAATTCACACAAACTCCTTGTGATCAAGATAACGATAAAGATCAAGATTCTTTTAATGAGGTATTTACACAAACTAAAAGAGGCCGCAAAACAACCATAAAAACAAGAGACAAGCTCTCAAGATCATCATCTCCATTCAGAATCTCCGATATCTTATACGACAATGAAAATAACAACAATGATAATAATAATAATAACAACAAAAACTCTCCAACTTGGTACAGCAAATGGAACATAAAGAACTTGATACTGTTTCGAAGTGTTTCAGAAGGGAGTGCAAGAAGAATCAAAGACCCAGTAAATAAATACACAAGAATAACAAAAGGTGATGAGGGTTCGAAGAAAGATTCAAGTTTTAGAAATGTAGAGAGTTGCAGATCGAGAAAGGTGTCAGCACATGAAATGCATTATACTGCGAATAGGGCGGTTGCTGAGGAGATGAGGAGGAAGACATACTTGCCGTACAAATCAGGGTTGTTTGGATGCTTGGGGTTGCATAACAATGGTGTTGGGGGTACTAGTGTTCGTCAGATATCTAAAGGGATTACTACTGTTATGAAACAACGATGA 981 41.9 MEIQIMTPSPPTSTNATPYTTAPSSPHRLPNFFYSAPTSPIHSLVSFHQHTDTDTDTDFAFDFTTNNPPQPPSLSAADELFHGGIIKPLKPIPNGPIQSNNQIISRTTDNDDQDHFTKMFTQPPSDDDDDDQDYFIKEFTQTPCDQDNDKDQDSFNEVFTQTKRGRKTTIKTRDKLSRSSSPFRISDILYDNENNNNDNNNNNNKNSPTWYSKWNIKNLILFRSVSEGSARRIKDPVNKYTRITKGDEGSKKDSSFRNVESCRSRKVSAHEMHYTANRAVAEEMRRKTYLPYKSGLFGCLGLHNNGVGGTSVRQISKGITTVMKQR 326
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr06g04410 326 Pfam Protein of unknown function (DUF1645) 77 291 IPR012442 -
Amtr06g04410 326 MobiDBLite consensus disorder prediction 108 125 - -
Amtr06g04410 326 PANTHER OS07G0619500 PROTEIN 21 304 - -
Amtr06g04410 326 MobiDBLite consensus disorder prediction 88 132 - -
Amtr06g04410 326 MobiDBLite consensus disorder prediction 187 208 - -
Amtr06g04410 326 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr06g04410 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
13001 Amtr06g04410 Amtr07g01013
358187 Amtr01g04386 Amtr06g04410
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr1:118129121 Amtr06g04410 Amtr-Chr6:97728750 dispersed
Amtr Amtr-Chr6:97728750 Amtr07g01013 Amtr-Chr7:14044602 dispersed
Amtr Amtr-Chr2:63686630 Amtr06g04410 Amtr-Chr6:97728750 wgd