AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr07g04529 ATGGCTTCTTTGTCGAAGGCGGACTCCAGGCGTATGTATTCTTGGTGGTGGAACAGCCACATTAGCCCCAAGAATTCGAAATGGCTTCAAGAGAATCTTACAGATGTCGATATCAAAGTGAAAGCAATGATAAAGCTCATCGAAGAAGACGCAGATTCATTTGCTAGAAGGGCAGAAATGTACTACAAAAAGCGTCCCGAGCTTATAAAACTTGTGGAAGAGTTATACAGAGCGTATCGAGCCTTAGCAGAAAAATATGATCATGCAACCGGGGCCCTTCGTCAGGCCCACAAAACAATGAGTGAAGCATTTCCAAATCAAGTACCCGCCGGATGTGACGACTCGGTTCCTAACTCGCCCTATGATTCTGATCCTCAGACTCCAGATTCAAGAACCAGCAAAATTCCATGTTTTGACTCTGATGACTTGCAGAACGACGGGTCAACGGGTACAGCAAGAAAAACCCTTAGTTTCAGTGAATCAGATGGCAGTAATAAATATCGGTCCCAAGACCGAAATCTATCTCGATTTGAGAATGTACGGGTGAATGACAAAGAAATCGCTTTATTAAAAGAGGCCTTAGCCAAGTTAGAAGATGAAAAAGACGCTGCCATGAAACAGTACGTCGAGAGTTTGGATAAATTATCGAAACTCGAGTCTGAGATGTTAAAGTCACAAGAAGATTCAAGAGAACTTGCTGACCGTGCAAGTAAAGCGGAGGCTGAATCCCAAGAAATGAAGGAAATGCTGCAAAGATTACAAGGCGAAAAGGAAGAAAGTTTTGAGCTTTACCATCGTGCGCAAAAGAAAATCGAGGAAATCAACGAGCAAAGTTTGAAAGAAGAGATTAAAAGTTTAAAAGATGAAAGAGATGCTGCTTATGATCAGTACAAACAATCTGTGAATCTGCAATCCGATTTGAAGAAAAAGTTATTAGAAGCAGAGAAGGAAATTGAAGAGTTGAAGCTAGCGATCGTTAATTTGACCAAAGAGAAAGAAGCGCAAGATATTTTGTACCAACAATGCATGGAGACTATTTCAAGCCTTGAACTTAGACTCGTTTGTGCAGAAGAAGAAACCGAAAGGCTGAAAGCCGAAATCGATAACGGAGTTTCACTTTTAAAAGCTGCGGAAGAACAACGGCTATTGTTAGAAAAGTCAAACAAGAGTCTTCAAACGGAATTGGAGTCGATGGGGGTCAGGATCGGTACTCAAAATCAAGAAATTACGGAGAAACAGAAGGAATTGGGAAGACTATGGACTTGCATACAAGAAGAACGTGTACGGTTTGTGGAGGCTGAGACTGCTTTCCAAACGTTGCAGCAATTACACGCCCAATCTCAAGAAGAGTTAAGATCAATGGCGGGCGAGTTACAAAATCGGGCTTTAGTTTTACGGGATATTGAAGCCTGTAACCAACTTTTAGAGGGAGAGATACAGAAGAAAATCGAGGAGAACAAGAACCTCGACGAACTCAACTTATCTTCTGCGATTACGTTGAAAGAAATGCAGAAAGAAATCAGTAGCTTAAAGGAATCTAACGGGAAGCTTGAGGAAGAGGTTGACCTTCGAGTTGACCAAAGAAATGCTCTTCAGCAAGAGATATATTGTCTAAAAGAGGAACTAAACGAGTTGAACAAGAAACACGGGGCGGTTGTGGAGCAAGTTGCTTATGTCGGGTTGAACCCGGAAAGCTTAGGTGCGTCTGTAAAGGAGTTACAGAATGAAAATATTAATTTGAAAGAAGAGTGGCAAAACGAAAAAACTGCAAAAGCGGCACTTTTGGAGAAACTGGAAATTATGGGTCAACTTCTTGAAAGAAACGTCGTTTTGGAAAATTCGTTATCAGATTTGGGTGCTGAGTTGGAAGGCGTAAGGGGTAAATTAAAAGCACTTGAAGAATCATATCAGTCTCTTTCAGAAGAAAAATCTAATCTCGCTGTTGAAAAGGCGAATTTGTTGGGTCAGTTACAAGTAACAACCGATGATCTGAGTCAAGTGTCGGAGAGAAACACCGTTCTTGAGAATTCCCTTTTTGATGCTCATGTTAAACTCGAAGTCTTGAAGCAAAAGTCAAAGAGTTTCGAAGATTCATGTCAATTGCTTGCCGATGAAAAGTCTGCGCTTATAACCGAAAAGGGTACTCTAGTCTCACAAATGGAAGTTGCTAAAAACAACTTAAAGGATCTGGAGCGGAAATACACAGATTTAGACGAGAAATACTCGTTCATGGAGAAAGAGAGAGAATCGACACTTCAAAAAGTTGAAGAGCTGAATGCATCATTGGCGATACAAAATCAAGAACACGTTACTTTTGCCCAAAAGAATGACATACAGTTGCATGCAATGAGGAGCCGAATTCAACGCCTGCAAGAAGAAAGTCTAAATAAAAGCAAAGAATTCAAACAAGAGCTCGATAAGTCGTTCGGTTCAGAAATCGAAATCTTTGTACTGTCGAAATGCGCTCAAGATCTTGAAGAAAAGAACGTTTCTTTGTTCAATGATTGTCAGAAACTCCAAGAAGCATCTAAGTTGTCCGAAAGTCTGATTCATGTGCTGAAACAAGAGAAAGCCGAAAACCAGTTAACGGTCAAGTCTTTATCGGATCAGAACAATAGATTGATTAACGGGATGCATCAATTGGTGAAAGCTGCTGGTCTTTCTTTACACTCGGGATATGTAAACGGGCAAGAACAAACATGTTTCAATAATATTCAGCAAAGAATTGAAGGCAAAAACCGTGCCCTGATTGAAAATGAAGATAAGAACATGGAGTTGGTTCTTGAGACGATGATTCTAGCCGCTGTTTTGAGGCAATTCAATACAAAATTGGTGGATCTTGAGGCGGAAAAGTGCGTTATTGAACGTGAGTTGTGTGTTCAGGCTGAAAAGATTCTTGGGCTGCAAAACGAGGTCTGCAAAATTTCGGAAACGAACGAAGAATTAAGATCGAAAGTAATTGAAGGAGATGTTAATGAAACGGGTCTAAGAACTCAGCTAGAGAATATACAGTGTGAGTTGTCAGATGTTCAAGAAGCTTTCAGAACTTTACAGACAGAGAATACCCTGATTCTTGAAGAAAAGAAATCTTTGTTGAAAGATAACGTTCAGAACAAGAACACGATATGCGTTCTAGAAGCGGAAAAAGACGTCCTCTTTACTGAAGTTTTAAGTCAAGGTATATTCTCTCTAACTTTGAAGAATCACATTGATGAGAAACACGAAGAACTTTATTCGGTTGAGAAGAAATATGAAGAGGTGGTAAACGAAAACCGTGATCTTAGAAAGACTTTGGAAAAATCGGAGCGTGAATTTAGAACGGTTCAATCTGTTCGCGATAAATTGAACCTGGATTTATTGAATGGAAATAATTTGTTGCAATTAAAAGAAAAGGAATTAAAGAATTTAGAGAATGATAAGAAGGAGCTGTCTGAGGTTGTCGCTGATCTGCGGGGAGAAAACGACGTTATTGTTAGTGAAGTCTTAAGTCAAGGTATCCTCGCTCAAGCATTGAAGAGTCACGTCGATGAGAAACATGAAGAACTATCGCTCGTTGAGAAGAAATTGAAAGAGGTGGTAAACGAAAATCTCGACCTTAGAAAAACTTTTGAAGAATCCGAGCACGAAATAAAAACGCTTCAATCTGTTCGTGATAAGTTGAATATGGATTTAGTGAATGGAAGTTGTTTGTTGCAATCAAAAGAAAAAGAATCAAAGATGTTAGAGAACGACAAGAAAGAGCTGGCTGAGATTGTAGCTGATTTGCGGAGAGAAAACGACGTCATTATTAACGAAGTGTTAAGTCAAGGTATCTTGTCGCAGACTTTGAAGAGTCACGTCGATGAGAAACATGAAGAACTATCTTTGGTTGAGAAGAAATTGAAAGGGGTGGTAAACGAAAACCTTGACCTCAGAAAGACTTTGGAAGAATTCGAGCATGAAATCAGAACGGTTCAGTCTGTTCGTGATAAAATGAACGTGGATTTATTGAATGGAAATAAGTTGTTGCAATTAAAAGAAAGGGAATCGAAAATGTTAGAGAATGACAACAAGGAGCTGTCTGAAACAGTAGCTGATCTTCGGAGAGAAAACGACGTCATTTTTATTGAAGTGTTAAGTCAAGGTATCGTCGCTCATACTTTGAAGAATCATGCCGGTGAGAAATATGAAGAGGTGGTAAACGAAAACCTTGACCTTAGAAAGACGTTGGAAGAATTCAAGCGCGAAATTAAAACGGTTCAATCTGTTCGTGATAAGTTGAATGTGGATTTAGTGAATGGAACTAATTTGTTGCGTAAAAAAGAAAAGGAATTAACGATCTTAGCAAATGACAAGAAGGAGCTGTCCGATATTGTAGCTAATCTGCAGAGAGAGAACGACGTTGTTTATAACGAAGTTTTAAGTCAGGTTGTCGTCTCTCAAACTTTGAAGAATTCCTTTGATGAGAAACATGAAGAACTATGTTCGGTTGAGAAGAAATTGGGAGAGTTGGTAAAGGAGAACCTTGATCTTAAAAATACTTTGGAAAAATCCGAACACGAAGTTAGAACTGTTCGTGATAAGTTGAATTTGGATTTAGCGAATGGAAATAATTTGTTGCAATCAAAAGAAAAAGAATTACAGGTTTTAGAGAATGACAAGAAGGAGCTGTCCGAGATTGTTGCTGATCTGCGGAGAGAAAACGACAGCGTTTTAAATGATGTTTTAAGTCAAGATATTGTCTCTCAAACTTTGAAGAATTACATCGACGAGAAACATGAAGAGTTATCGTTGGTTGAGAAGAAATTGGAAAAATCTGAGCACGAATGTCGAACTGTTCAATCTGTTCGCGATAAGCAACTGAGATTGTTGCAATTAAAGGAAAAGGAATTAAAGATCTTAGCAACCGACAATAAGGAGATGTCTGAGATTGTTGCTGATCTGCGAAGAGAAAGCGACATCATTTTTAGTGAAGTTTTAAGCCAAGGTATCGTCTCTCAAACTTTGAAGAATCACGTTGATGATAAAAATGAACAACTATCTTTGGTAGAGAAGAAACTCGACGAGGTAGGAAACGAAAACCTTGACCTTAGAAAGACTTTGGAAGCATCTGAGCACGAAATTCAAACGCTTCAATCTGTTCATGATAAGTTGAATCTTGACAATAAGGAGATGTCTGAGATTGTTGCTGATCTGCGAAGGGAAAACGACGTCCTTTTTGATGAAGTATTAAGTCAAGGTATCGTCTCTCAAACTTTGAAGAATTACATTGGCGAGAAACATGAAGAATTATCTTTCGTCGAGAAGAAATTGGAAAAATCCGAGCATGAGTTTAGAACGGTTCAATCTGACAAGAAGGAGCTGTCGGAGATCGTAGCTGATCTGCAGAGAGAGAACAACGAGGTTGTAATGACGAACAATCAGCAAGGGAAGCGAATTCTCGAACTAGTAGAAGATAATGATCATTTGAGCAAAGACAGCCGGAATTTGGAGGTTAAAATGCAGCAACTGACGGAAAAGCTTGAAAAAACGGAGGAAAAGACACGATTGCTGGAAACAGAGGCGTCGTTGATCTATGGGGATTTGCAGACTGCAATTATTTGTCAAGCTTTGTTAGAACGGAAGATCAGTGAGCTTGCTGACGTTTGTTTTAGTCTTCAAGACGAAAATAATTCCAAAGATTTGAATAATGAATTGCTTAAAGAAAGGAGCAATATTTTGGAATGTGAGAATGTTGATCTTAAAGGTCGTTTGGATGCATATGGTCCGGCCATTGAATCGTTGAGGGAAAGTATCGTATCCTTGGAAAATCATACCTGTATCGAAACCAAAGTCCCACTGTCCAAAAACGAGAAGCACGGAGAATCTGCAACCATGAAACGGGATGCATTTGTCGAGTTGCAGGATCTTCAAAGTAAGGTGAAAGTTATTGAAATGGCGGTAGCCGAGACGCAAACGCTCTCGGATCAACAAAAGTTGGATTCAGATGCAAAGCTGAAGTCCGCGATGATGCAGATCGAAGAATTGAGTCAGCCAAAGAATTACCGTATGCCGAAATCAACATCCGAAATCTCAGAGGCAGATCCAAAAGATATCATGCTTGATCAAGCGTCTGAATGTTCGTCGTACGGTGTAAGCAAACGGGGATTGATCGAAGGCGAGATTTGGGAAACCACTGATGATTCCAGAACTATGTTCAAACATCATCCCACCGCTTCAGACGATAACATACTAGAAGTTTCCAGAAGGTTTAAGGAGCCTCACGAAGACGGAAACAAGAGGAAGGTCCTCGAAAGACTCAATTCCGATGTTCAAAGATTGACGAATCTCCAAATCACTATCGATGATTTGAAGCGGAAAGTCAACACTACATTAAAGAACAGAAGGGGAAAAGCAGTGATCGAATGCGAGACACTGAAAGGACAGCTAACAGAAGCTGAATCCGCCATTGAGAAACTATACGAACTCAACGCTAGATTAGTTAATCATATTGAGGGTAACCCTGAGAAATCATCTACATCGGAATCAGGAGAAACCGAAAGCGTGAGAAGAAAAAAAGTGGCGGAACAAGCAAAGCGTGTTTCTGAAAGCATCGGTCGAATGCAAATAGAGATACAAAAGATACAGTTCAAGTTATTGAAACTCGACGATGAAAGCGAAGCGACTGGGAAAAAGAGGTCACTCGACACCAAAAAACGGGTTGTGTTGAAAGATTATCTTTATGGTGGCGGACGAACAAGAACAGCGATCAACACCAACAACAGGCGAAAGAAAGGTCATTTTTGTGGTTGTGTCGAGCCTTCGACTAAAGGAGACTAA 6798 39.82 MASLSKADSRRMYSWWWNSHISPKNSKWLQENLTDVDIKVKAMIKLIEEDADSFARRAEMYYKKRPELIKLVEELYRAYRALAEKYDHATGALRQAHKTMSEAFPNQVPAGCDDSVPNSPYDSDPQTPDSRTSKIPCFDSDDLQNDGSTGTARKTLSFSESDGSNKYRSQDRNLSRFENVRVNDKEIALLKEALAKLEDEKDAAMKQYVESLDKLSKLESEMLKSQEDSRELADRASKAEAESQEMKEMLQRLQGEKEESFELYHRAQKKIEEINEQSLKEEIKSLKDERDAAYDQYKQSVNLQSDLKKKLLEAEKEIEELKLAIVNLTKEKEAQDILYQQCMETISSLELRLVCAEEETERLKAEIDNGVSLLKAAEEQRLLLEKSNKSLQTELESMGVRIGTQNQEITEKQKELGRLWTCIQEERVRFVEAETAFQTLQQLHAQSQEELRSMAGELQNRALVLRDIEACNQLLEGEIQKKIEENKNLDELNLSSAITLKEMQKEISSLKESNGKLEEEVDLRVDQRNALQQEIYCLKEELNELNKKHGAVVEQVAYVGLNPESLGASVKELQNENINLKEEWQNEKTAKAALLEKLEIMGQLLERNVVLENSLSDLGAELEGVRGKLKALEESYQSLSEEKSNLAVEKANLLGQLQVTTDDLSQVSERNTVLENSLFDAHVKLEVLKQKSKSFEDSCQLLADEKSALITEKGTLVSQMEVAKNNLKDLERKYTDLDEKYSFMEKERESTLQKVEELNASLAIQNQEHVTFAQKNDIQLHAMRSRIQRLQEESLNKSKEFKQELDKSFGSEIEIFVLSKCAQDLEEKNVSLFNDCQKLQEASKLSESLIHVLKQEKAENQLTVKSLSDQNNRLINGMHQLVKAAGLSLHSGYVNGQEQTCFNNIQQRIEGKNRALIENEDKNMELVLETMILAAVLRQFNTKLVDLEAEKCVIERELCVQAEKILGLQNEVCKISETNEELRSKVIEGDVNETGLRTQLENIQCELSDVQEAFRTLQTENTLILEEKKSLLKDNVQNKNTICVLEAEKDVLFTEVLSQGIFSLTLKNHIDEKHEELYSVEKKYEEVVNENRDLRKTLEKSEREFRTVQSVRDKLNLDLLNGNNLLQLKEKELKNLENDKKELSEVVADLRGENDVIVSEVLSQGILAQALKSHVDEKHEELSLVEKKLKEVVNENLDLRKTFEESEHEIKTLQSVRDKLNMDLVNGSCLLQSKEKESKMLENDKKELAEIVADLRRENDVIINEVLSQGILSQTLKSHVDEKHEELSLVEKKLKGVVNENLDLRKTLEEFEHEIRTVQSVRDKMNVDLLNGNKLLQLKERESKMLENDNKELSETVADLRRENDVIFIEVLSQGIVAHTLKNHAGEKYEEVVNENLDLRKTLEEFKREIKTVQSVRDKLNVDLVNGTNLLRKKEKELTILANDKKELSDIVANLQRENDVVYNEVLSQVVVSQTLKNSFDEKHEELCSVEKKLGELVKENLDLKNTLEKSEHEVRTVRDKLNLDLANGNNLLQSKEKELQVLENDKKELSEIVADLRRENDSVLNDVLSQDIVSQTLKNYIDEKHEELSLVEKKLEKSEHECRTVQSVRDKQLRLLQLKEKELKILATDNKEMSEIVADLRRESDIIFSEVLSQGIVSQTLKNHVDDKNEQLSLVEKKLDEVGNENLDLRKTLEASEHEIQTLQSVHDKLNLDNKEMSEIVADLRRENDVLFDEVLSQGIVSQTLKNYIGEKHEELSFVEKKLEKSEHEFRTVQSDKKELSEIVADLQRENNEVVMTNNQQGKRILELVEDNDHLSKDSRNLEVKMQQLTEKLEKTEEKTRLLETEASLIYGDLQTAIICQALLERKISELADVCFSLQDENNSKDLNNELLKERSNILECENVDLKGRLDAYGPAIESLRESIVSLENHTCIETKVPLSKNEKHGESATMKRDAFVELQDLQSKVKVIEMAVAETQTLSDQQKLDSDAKLKSAMMQIEELSQPKNYRMPKSTSEISEADPKDIMLDQASECSSYGVSKRGLIEGEIWETTDDSRTMFKHHPTASDDNILEVSRRFKEPHEDGNKRKVLERLNSDVQRLTNLQITIDDLKRKVNTTLKNRRGKAVIECETLKGQLTEAESAIEKLYELNARLVNHIEGNPEKSSTSESGETESVRRKKVAEQAKRVSESIGRMQIEIQKIQFKLLKLDDESEATGKKRSLDTKKRVVLKDYLYGGGRTRTAINTNNRRKKGHFCGCVEPSTKGD 2265
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr07g04529 2265 Coils Coil 822 842 - -
Amtr07g04529 2265 Coils Coil 2129 2149 - -
Amtr07g04529 2265 Coils Coil 1666 1735 - -
Amtr07g04529 2265 MobiDBLite consensus disorder prediction 119 164 - -
Amtr07g04529 2265 Coils Coil 773 800 - -
Amtr07g04529 2265 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779(InterPro)
Amtr07g04529 2265 Coils Coil 500 520 - -
Amtr07g04529 2265 MobiDBLite consensus disorder prediction 105 170 - -
Amtr07g04529 2265 Coils Coil 1175 1223 - -
Amtr07g04529 2265 Coils Coil 1000 1020 - -
Amtr07g04529 2265 PANTHER PROTEIN NETWORKED 4A 277 964 IPR051861 -
Amtr07g04529 2265 Coils Coil 1431 1465 - -
Amtr07g04529 2265 Coils Coil 1813 1847 - -
Amtr07g04529 2265 Coils Coil 1294 1314 - -
Amtr07g04529 2265 Coils Coil 615 656 - -
Amtr07g04529 2265 Coils Coil 1231 1265 - -
Amtr07g04529 2265 Coils Coil 1750 1794 - -
Amtr07g04529 2265 Coils Coil 472 492 - -
Amtr07g04529 2265 Coils Coil 1084 1104 - -
Amtr07g04529 2265 Coils Coil 1336 1363 - -
Amtr07g04529 2265 MobiDBLite consensus disorder prediction 220 243 - -
Amtr07g04529 2265 Coils Coil 1119 1153 - -
Amtr07g04529 2265 Coils Coil 528 548 - -
Amtr07g04529 2265 Coils Coil 570 601 - -
Amtr07g04529 2265 Coils Coil 1582 1602 - -
Amtr07g04529 2265 Coils Coil 1494 1567 - -
Amtr07g04529 2265 Coils Coil 713 768 - -
Amtr07g04529 2265 Coils Coil 1389 1423 - -
Amtr07g04529 2265 Coils Coil 304 394 - -
Amtr07g04529 2265 MobiDBLite consensus disorder prediction 2158 2178 - -
Amtr07g04529 2265 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779(InterPro)
Amtr07g04529 2265 Coils Coil 2093 2120 - -
Amtr07g04529 2265 Coils Coil 180 296 - -
Amtr07g04529 2265 Coils Coil 1624 1644 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr07g04529 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr6:35139802 Amtr07g04529 Amtr-Chr7:95067311 dispersed
Amtr Amtr-Chr7:83128980 Amtr07g04529 Amtr-Chr7:95067311 dispersed
Amtr Amtr-Chr7:95067311 Amtr11g02708 Amtr-Chr11:57880544 dispersed
Amtr Amtr-Chr12:38767291 Amtr07g04529 Amtr-Chr7:95067311 transposed
Amtr Amtr-Chr7:95067311 Amtr08g01616 Amtr-Chr8:36027595 wgd