Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr07g04621 | ATGGGACTTTGCTTCTCTTCGACTAAGGATGATGAAGAACCTGCCTATCATCCTCATTTTACGGGAGGTAAAGTCACCGTTATCACTACCAAGGATGCTTGGAACCAAAAGCTCTCGGAAGCAAAGACTCAAAGCAAAATAGTGATCGCTAACTTTAGTGCATCTTGGTGTGGTCCATGCAAATCGATTTCAACATTATATATTGAGCTTTCCGAGAAGCATCCCTCTCTTATGTTTCTGACCATAGACGTTGATGAATTACCGGAGTTAAGCACACAATGGGATGTAAAAGCTACTCCAACATTCTTCTTCCTTAAAGATGGGCAACAAATCGATAAAGTTGTGGGTGCCAACAAGCCCGAAGTGCAGGAAAAGATAGCCGCCATAGTCGGTTCAAAAGTCCCAGGTGATCATCAAAAGTAA | 423 | 42.55 | MGLCFSSTKDDEEPAYHPHFTGGKVTVITTKDAWNQKLSEAKTQSKIVIANFSASWCGPCKSISTLYIELSEKHPSLMFLTIDVDELPELSTQWDVKATPTFFFLKDGQQIDKVVGANKPEVQEKIAAIVGSKVPGDHQK | 140 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr07g04621 | 140 | PANTHER | THIOREDOXIN | 23 | 128 | IPR050620 | - | |
| Amtr07g04621 | 140 | SUPERFAMILY | Thioredoxin-like | 21 | 128 | IPR036249 | - | |
| Amtr07g04621 | 140 | Pfam | Thioredoxin | 26 | 125 | IPR013766 | - | |
| Amtr07g04621 | 140 | CDD | TRX-family | 38 | 127 | - | - | |
| Amtr07g04621 | 140 | Gene3D | Glutaredoxin | 2 | 136 | - | - | |
| Amtr07g04621 | 140 | ProSitePatterns | Thioredoxin family active site. | 49 | 67 | IPR017937 | - | |
| Amtr07g04621 | 140 | ProSiteProfiles | Thioredoxin domain profile. | 7 | 131 | IPR013766 | - | |
| Amtr07g04621 | 140 | FunFam | Thioredoxin | 22 | 131 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr07g04621 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 206146 | Amtr | Amtr03g04800 | Amtr-Chr3:103318809 | Amtr07g04621 | Amtr-Chr7:98168498 | |
| 208177 | Amtr | Amtr03g07152 | Amtr-Chr3:165794580 | Amtr07g04621 | Amtr-Chr7:98168498 | |
| 214126 | Amtr | Amtr05g00342 | Amtr-Chr5:5725642 | Amtr07g04621 | Amtr-Chr7:98168498 | |
| 228555 | Amtr | Amtr07g04621 | Amtr-Chr7:98168498 | Amtr10g00117 | Amtr-Chr10:2543536 | |
| 297235 | Amtr | Amtr12g00252 | Amtr-Chr12:7838439 | Amtr07g04621 | Amtr-Chr7:98168498 |