AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr07g04625 ATGGCTTCTGTTGCTCAGCTTCATCACTCTCCTTTCGCTGGAAACAACCGTTATTCGAATCCCGCTAGGCGTATTCCTGGACTCCAGTTACCAACTTTTACCGGCAAAAACCATGTCGATTTTACCGGTTTGTTTCACCCATTTAAGCCAAGTGAGTTACTATCAAACCGACAACTTATTCCCTGTGCTGGTGGCAGCGGTGGTAATGCTGGTGTTGGCCACGGAAGCGGTGGCCGAGGAGGTAATGGTGGTGATAGTGACCCGAACGAAGGGGGAAAATTCGACGACAATTCATCGGTAGACAGTTTCGGGCCGTTTGGGGCTTTTCTTAGTGGTTGGAGATCAAGGGTGGCAGCTGATCCACAATTTGCATTCAAGGTGTTAATGGAGGAAGTTGTAGGTGTGAGTGCAACCGTGTTTGGTGACATGGCAACTCGTCCGAATTTCGGTCTAAACGAGCTAGATTTCGTGTTCTCGACACTAGTAGTAGGATCGATATTGAATTTTACCCTCATGTATCTATTAGCACCCACCATGGCGTCCACGTCAACCACCCTCCCTTTCATTTTCGCCAATTCGCCAACGAGCCACATGTTCGAGCCGGGTGCATACAGCCTTGTTAACCGGCTAGGCACATTTGTGTACAAAGGAATATTGTTTGCAGCAGTGGGGTTTGCGGCGGGTTTAGTTGGGACCACGTTGTCAAATGGGTTGATCAAGATAAGGAAGAAAATGGACCCCGGGTTCGAATCACCAAACAAGGCTCCACCTACTGTATTGAATGCGGTCACATGGGCGATTCATATGGGTCTAAGTGCTAATCTGAGGTACCAAAGTCTTAACGGGGTCGAGTTTGTGCTGGCGAAGGGGTTGCCGCCGTTGTTGTTTAAGAGCTCTGTATTCGGGTTGAGATTGGCTAACAATGTTCTTGGTGGAATGACTTTTGTGATGTTGGCAAGGGTGACCGGGTCGCAAAGCGCTGCTAGTGGTGACCAGAACGTTGTGGATGAAAAGGTTTCGAGCTGA 1026 48.93 MASVAQLHHSPFAGNNRYSNPARRIPGLQLPTFTGKNHVDFTGLFHPFKPSELLSNRQLIPCAGGSGGNAGVGHGSGGRGGNGGDSDPNEGGKFDDNSSVDSFGPFGAFLSGWRSRVAADPQFAFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMASTSTTLPFIFANSPTSHMFEPGAYSLVNRLGTFVYKGILFAAVGFAAGLVGTTLSNGLIKIRKKMDPGFESPNKAPPTVLNAVTWAIHMGLSANLRYQSLNGVEFVLAKGLPPLLFKSSVFGLRLANNVLGGMTFVMLARVTGSQSAASGDQNVVDEKVSS 341
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr07g04625 341 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 64 327 - -
Amtr07g04625 341 MobiDBLite consensus disorder prediction 1 23 - -
Amtr07g04625 341 Pfam Protein RETICULATA-related 116 283 IPR021825 -
Amtr07g04625 341 MobiDBLite consensus disorder prediction 70 97 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr07g04625 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
223734 Amtr Amtr06g05038 Amtr-Chr6:113510603 Amtr07g04625 Amtr-Chr7:98265300
228558 Amtr Amtr07g04625 Amtr-Chr7:98265300 Amtr09g01988 Amtr-Chr9:49051165
297236 Amtr Amtr12g00265 Amtr-Chr12:8016469 Amtr07g04625 Amtr-Chr7:98265300