AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr07g04629 ATGCATCTGATGAGGCTTCATTTCAAAAGTCTACTGAAGCATGTTCTGTTAATTTGGTTATTCTGGTGGCCTATAACTGAATCGCAGTTATCGAATCCTCAATCAAAGCCTGCTAGGGCTCTTGATGAAACGTTACAAGACTACGCTTATCGCGCATTTGCTCATCCGCGTACAGGCGTTCCCTATGATGGTACTGTCCCTTCCTATTTGACTGGTATTGAGATATCAGCAATGAGGCTAAGAAGTGGTAGTTTGTTTAATAGAGGCGTTGAGCCGTTTAAGGAGTTTAGGATTCCGGTTGGCTTACGGGTGGAACCGTATGTCGAGAGACTTGTTTTGGTGTATCAAAATTTAGGGAATTGGTCCACAAGTTATTACTCGTTACCTGGTTATGTTTATCTAGCTCCAGTTTTAGGTCTGCTTGCATACAATGGTTCAGATTTATCGGGTTCTAATCTACGTGAACTTGACTTGTGGGCATCTGAGGGAGCTATTAGAATAAAGTTTGGAATAATAAGCTCGATACCTGTTGGTTCGATTGCAAAGTGTGTGTGGTTTGATTTAGATGGTCAGGTGAATTTAACAGATTTAGAACCTGGGAATGAATGTTTGGCGACTGAACATGGGCATTTCTCCGTTGTAGTTGAATCGATTGACGCTCCTGTAATTGTACCTCCTGCACCACATGAAGCTCCTGCACCTAGTAGTAGAACGAACAACAAGTCTAAGAAATGGCGTATGTTTGGGTTAATATTTGGTGGAATATTCGCGCTTTTTGTGTTGGTGCTGCTAATATTGTGTGCATTGTGGCACAGAAGGAGGAATGTAATGCGCGAACTAGTAAGAGCCGCAGATGCTGGTGAAGCGTTGAGGATGACCCGAGTCGGGAGCATGAGAGCACCATTTGCAATGGCTACCAGAACGATGCCAAATCTTGAAGACGTCTTACCTACTTGA 957 43.26 MHLMRLHFKSLLKHVLLIWLFWWPITESQLSNPQSKPARALDETLQDYAYRAFAHPRTGVPYDGTVPSYLTGIEISAMRLRSGSLFNRGVEPFKEFRIPVGLRVEPYVERLVLVYQNLGNWSTSYYSLPGYVYLAPVLGLLAYNGSDLSGSNLRELDLWASEGAIRIKFGIISSIPVGSIAKCVWFDLDGQVNLTDLEPGNECLATEHGHFSVVVESIDAPVIVPPAPHEAPAPSSRTNNKSKKWRMFGLIFGGIFALFVLVLLILCALWHRRRNVMRELVRAADAGEALRMTRVGSMRAPFAMATRTMPNLEDVLPT 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr07g04629 318 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 16 314 IPR010605 GO:0016020(PANTHER)
Amtr07g04629 318 Pfam Protein of unknown function (DUF1191) 37 216 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr07g04629 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
220826 Amtr Amtr06g01658 Amtr-Chr6:33683915 Amtr07g04629 Amtr-Chr7:98414630
226371 Amtr Amtr07g02075 Amtr-Chr7:28957450 Amtr07g04629 Amtr-Chr7:98414630
228561 Amtr Amtr07g04629 Amtr-Chr7:98414630 Amtr08g05539 Amtr-Chr8:134011157
297237 Amtr Amtr12g00267 Amtr-Chr12:8039526 Amtr07g04629 Amtr-Chr7:98414630