AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr07g04630 ATGGCGTACCGTAGACGTGGAGGACTTTCGAGGTCTTCGACGTTCAACGAAGGAATTCGATGTGATTCGCGGGACAAAGATGACGATTATAAGGCCACCACGTCTTATGTTGGTTTGCCGCACAGATCTTCCGATCCTCGGCTTGATTCTTTTCGCTCCGGTGCCTTTCACTCGTCGTTTAAACATCGATCGAAGGGTTCTGGTACCTCTGATTATGCTTCCGCAAGGAGCTCAAATGAACGAGGGGGATTTTGGGGCGTTTTGGCAAGGAAAGCTAAAGCCATCCTCGAAGGTGATATACCTCAACAATCAAATTCTCCTAGGAGTGTAAAGCGAGAAACGATTGGTTTCTTAACAAGCCACCAGAAACGCACTGGCATTCAGATTCGGAATCAAAATACATCCTTTGAGGATTTGAAGAAACTGGAGAGTCCCGCAATAAAGATCCGATTGGACAAGCTCACACCCTCACTTAATCAAATTGGTTACACCATTGGCAATTCTCTAGAGAACAGAAGACCAGAAGTGAAAAATGAAGAAAAGAATCAAGAGCCTAAAATGCAATCTGCCCAACGACTAAAGAACCAAGAAACTCTACTTCAGGCTTCTCGCGACGTGGCGATTGCAACAGCTGCTAAGGCGAAACAACTTATGCGGGAGCTGAAAACTGTGAAGACAGAATTGGCATCTGCAAAATCCCGATGTCGTCAGCTAGAAGAGGAAAATAAACGACTTTTAAGAGCTCATGGAAAAGGAGATCACCCTACAGATGATGATATGATACGAGTTCAGCTAGAGACACTATTGGCAGAAAAGGGGCGTTTGGCGCATGAGAACGCTGTGCATGCACTTGAGAACAGGTACTTGAGGGAAATAGTTGATTTCCACCAACTAACCATGCAAGATTTAATGTATGCGGACAATGAGGGCGTTATTGAGGTCATACTACCCGCAACACCAGAAGCCTATCGAAATATGGTGGATGGCTCATCCTCTAGTTTTAGCAGGTCAGTATAG 1017 45.23 MAYRRRGGLSRSSTFNEGIRCDSRDKDDDYKATTSYVGLPHRSSDPRLDSFRSGAFHSSFKHRSKGSGTSDYASARSSNERGGFWGVLARKAKAILEGDIPQQSNSPRSVKRETIGFLTSHQKRTGIQIRNQNTSFEDLKKLESPAIKIRLDKLTPSLNQIGYTIGNSLENRRPEVKNEEKNQEPKMQSAQRLKNQETLLQASRDVAIATAAKAKQLMRELKTVKTELASAKSRCRQLEEENKRLLRAHGKGDHPTDDDMIRVQLETLLAEKGRLAHENAVHALENRYLREIVDFHQLTMQDLMYADNEGVIEVILPATPEAYRNMVDGSSSSFSRSV 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr07g04630 338 MobiDBLite consensus disorder prediction 60 77 - -
Amtr07g04630 338 MobiDBLite consensus disorder prediction 59 78 - -
Amtr07g04630 338 MobiDBLite consensus disorder prediction 172 187 - -
Amtr07g04630 338 MobiDBLite consensus disorder prediction 169 189 - -
Amtr07g04630 338 Coils Coil 214 248 - -
Amtr07g04630 338 PANTHER UNCHARACTERIZED 1 179 - -
Amtr07g04630 338 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr07g04630 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
220827 Amtr Amtr06g01659 Amtr-Chr6:33687582 Amtr07g04630 Amtr-Chr7:98470722
220945 Amtr Amtr06g01813 Amtr-Chr6:35811697 Amtr07g04630 Amtr-Chr7:98470722
265506 Amtr Amtr07g04630 Amtr-Chr7:98470722 Amtr04g02796 Amtr-Chr4:55331711