Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr07g04633 | ATGGACATCGAAAAGAAAGACGAACAACCCCTCAGATTGTTTCCGGTTCCGGTCGCCCCTGCAGGCGACCAGAACCGTAAACTCAAACGCCGAAGATGCATAATCATATGCTCTTCGGTACTCGGTGTACTCCTCACCATTATTCTTATCATCGTTATATTATCCTTAACCGTATTCAAAGCCAAAAAACCAATCCTAACCGTCAACTCCGTAGCACTCGACGATTTCGACGTGTTGATCACTCCTTTACCACTCAAAGTCTCATTAAACTTGTCATTAGCTCTCGACTTGACAATTAAAAATCCTAACAAAGTCAGTATTAAGTACCGGAGCAGCTCTGCAACGCTCCGGTACAAAGGTAGGGACGTGGGTGACGTCCCTATCCCTGCAGGGAAAATTGGGTCAGATGATTCGGAAAGGTTGAATCTAACGGTTGTTATATTTGCTGATCGGTTGGTTACGGATTCGGAGATATACAGAGATGTTCTTAATGGTAATTTGCCTTTTTCGACGTATACGAGGATTAAGGCTAAGGCTAGAGTTGTGTTTTTTAATGTTGAGGTTACTTCTACTTCTACTTGTGATGTGAATATTGATATTGCAAGTAGAAGTATTTCTAATCAGACTTGCCAGTACAAGAATAATTTAGGGTAA | 654 | 41.74 | MDIEKKDEQPLRLFPVPVAPAGDQNRKLKRRRCIIICSSVLGVLLTIILIIVILSLTVFKAKKPILTVNSVALDDFDVLITPLPLKVSLNLSLALDLTIKNPNKVSIKYRSSSATLRYKGRDVGDVPIPAGKIGSDDSERLNLTVVIFADRLVTDSEIYRDVLNGNLPFSTYTRIKAKARVVFFNVEVTSTSTCDVNIDIASRSISNQTCQYKNNLG | 217 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr07g04633 | 217 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 22 | 206 | - | - | |
| Amtr07g04633 | 217 | Pfam | Late embryogenesis abundant protein | 97 | 194 | IPR004864 | - | |
| Amtr07g04633 | 217 | Gene3D | - | 52 | 199 | - | - | |
| Amtr07g04633 | 217 | SUPERFAMILY | LEA14-like | 61 | 153 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr07g04633 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 211177 | Amtr | Amtr04g03242 | Amtr-Chr4:68360613 | Amtr07g04633 | Amtr-Chr7:98689147 | |
| 220832 | Amtr | Amtr06g01665 | Amtr-Chr6:33759453 | Amtr07g04633 | Amtr-Chr7:98689147 | |
| 268890 | Amtr | Amtr10g00759 | Amtr-Chr10:12115158 | Amtr07g04633 | Amtr-Chr7:98689147 | |
| 297238 | Amtr | Amtr12g00284 | Amtr-Chr12:8588076 | Amtr07g04633 | Amtr-Chr7:98689147 |