Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr07g06208 | ATGCTCAATCTTTTGAACAAAAAACTCCGGCAACTCTGCTCAAACCTCCGGTGTCCAATAAACCGCCGTAGAAAGCCCAAAATCATCATCAAAAGGTTAAAAAATCCAAACTTTATTAATAATAAACATTCATCAAACCCAAATGGGTCAGCCACAATTCACCCAAATAACCAATTATCTGTAACCCCAATAAGAATTGCATCTTTTAATGCAGCCCTGTTCTCCATGGCTCCTGCGTTGACCAAGAAAGGTCTAACCTTTGACTTTTTTAATAATGATCAAGATTCTTTCAAGGTAGCTTCTAATTCCTCAGTTTCAAAGTCAAAATCATTGGTTGATAGGCCCAAAAGTATATTAAAACAATCATCATTGCATTTAAGTTCAGTTAGTAGTTCAAATCATAGTTTGTTAGAACAGTCAAAGCAGCAGAAATATGCAAAGCCAAAGCTTAGGGTGTCTATTAATTTACCGGTCAACGAGATCTCGTTGAAGCGAAACGGGCAAATGGGGTTAGTTGTAGAGGGTACTGAAACCGACCCAAGTTTGAAAATAAGGAAGGTTTTGAAAGGAAAAGGTGTTTTGAGGGAGTTGGGAAGCGAAAGAGGCGAGTATCGGTCAACCAAGAGTGTTGTTGAGGTTTTGAGGGAATTGGATGCAGATATATTGGCTTTGCAGGATGTGAAAGCTGAAGAGGAAAAGGATATGAAGCCATTGTCTGATTTGGCTGCTGCTTTGGGTATGCATTATGTTTTTGCTGAAAGCTGGGCGCCTGAGTTTGGTAATGCGGTTTTGTCGAAATGGCCGATTAAACGGTCCAAGGTTCAGAAGATTTTTGATGAGTCTGATTTCAGGAATGTGTTAAAAGCGACAATTGATGTTCCCGAAACTGGAGAAGTTGATGTTCATTGCACGCTTCTTGATCATCTTGATGAGAATTGGCGAATGAAACAGATAAACGCAATAATCGAGTCTAATGAGAGACCACACATCTTAGCTGGAGTTATCAACTCCCTTGACGAAACAGACTACTCGACCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGAACAAACAATACACCGATGCCAAGGACTGTGCAGGCGAATGCGAATCTGTAGTCATTATTGCTAAAGGCCAAAATGTGCAGGGTACGTGCAAATATGGTACTAGGGTAGATTACATATTGATGTCCCCTGATTCTCCCTACAAGTTTGTTCCGGGTTCATATATGGTTTTATCATCAAAAGGTACTTCTGACCATCATATAGTTAAAGTTGATGTAACGAAGGCAGACGATTCTTGTCAAGAACCGGTTGTTAGGAGGCAGCGACATCCTAAACAAAAAGTTGTGAAGATCACAAATTCTAACTCATCAAAAGGGATATGGAAAATGCAAACTTTAGCAGGGCATGGGAGATATAGGGACACAGAAAGTGATGTGGTTAAATAA | 1500 | 39.8 | MLNLLNKKLRQLCSNLRCPINRRRKPKIIIKRLKNPNFINNKHSSNPNGSATIHPNNQLSVTPIRIASFNAALFSMAPALTKKGLTFDFFNNDQDSFKVASNSSVSKSKSLVDRPKSILKQSSLHLSSVSSSNHSLLEQSKQQKYAKPKLRVSINLPVNEISLKRNGQMGLVVEGTETDPSLKIRKVLKGKGVLRELGSERGEYRSTKSVVEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMHYVFAESWAPEFGNAVLSKWPIKRSKVQKIFDESDFRNVLKATIDVPETGEVDVHCTLLDHLDENWRMKQINAIIESNERPHILAGVINSLDETDYSTERWTDIVKYYEEMGKPTPKVEVMKYLKNKQYTDAKDCAGECESVVIIAKGQNVQGTCKYGTRVDYILMSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVTKADDSCQEPVVRRQRHPKQKVVKITNSNSSKGIWKMQTLAGHGRYRDTESDVVK | 499 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr07g06208 | 499 | Pfam | Endonuclease-Exonuclease-phosphatase family | 202 | 332 | IPR005135 | GO:0003824(InterPro) | |
| Amtr07g06208 | 499 | FunFam | Endonuclease-exonuclease-phosphatase family protein | 196 | 447 | - | - | |
| Amtr07g06208 | 499 | PANTHER | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | 49 | 443 | IPR051916 | GO:0005783(PANTHER)|GO:0006506(PANTHER) | |
| Amtr07g06208 | 499 | SUPERFAMILY | DNase I-like | 207 | 444 | IPR036691 | - | |
| Amtr07g06208 | 499 | Coils | Coil | 214 | 234 | - | - | |
| Amtr07g06208 | 499 | Gene3D | Endonuclease-exonuclease-phosphatase | 193 | 447 | IPR036691 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr07g06208 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 360822 | Amtr07g06208 | Amtr12g00598 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr7:25106602 | Amtr07g06208 | Amtr-Chr7:131506933 | dispersed | |
| Amtr | Amtr-Chr12:18333814 | Amtr07g06208 | Amtr-Chr7:131506933 | wgd |