AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr07g06351 ATGGGTGATCTAACAAGCACAGTATACACAAGAGCCAAAAGATCATACAGGCGGAGGCGAGGCTACCGCCGCCTCGCCACAGCCACAAATGAATCGCGATCAAGGTGGCCCAGGATGAGGATACCACGTAGGTTGAAGATAAAGCTAAGGTTTAGCCCCAAGAAGCTGCTTGCTAGTGTTCATGGTGCTTATGTGAGGATGATGATAAGGCTTGCGAATTCGTCGTTGGTACGAGGAGGCGCAATAGCTGGATATGGCGCTGGAGGAGGGATCGGTCAGTTTGGGATGAGGCCCATGAAGGAATATGATGAGAAGATAATAATTCAGTTGTGTAAATCGCTGTCGGTTAGGCCGGAGCAACCCGTGGCATTAGAGGTTGATCGAGCTGATCCAGATAACTTGTTTGCAGTAATTCGTTGA 420 49.29 MGDLTSTVYTRAKRSYRRRRGYRRLATATNESRSRWPRMRIPRRLKIKLRFSPKKLLASVHGAYVRMMIRLANSSLVRGGAIAGYGAGGGIGQFGMRPMKEYDEKIIIQLCKSLSVRPEQPVALEVDRADPDNLFAVIR 139
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr07g06351 139 PANTHER BNAA09G40010D PROTEIN 5 117 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr07g06351 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
360839 Amtr07g06351 Amtr12g00347
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
229979 Amtr Amtr07g06351 Amtr-Chr7:135494715 Amtr12g00347 Amtr-Chr12:10012372
265967 Amtr Amtr07g06351 Amtr-Chr7:135494715 Amtr06g02712 Amtr-Chr6:50500028
274140 Amtr Amtr07g06351 Amtr-Chr7:135494715 Amtr06g01680 Amtr-Chr6:33998172