Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr08g04017 | ATGAAGACATCGTTTGGAAAATTAGGGCGTAAATTAACGATGCAGAAAAGCGATATGAAAGAGATGAAAGATCATCAGGCTTCTGCACATGTAGATGAGCTTAATCAGGCTTCGAAGGATATACAAAATATGAGAAGCTGCTATGATGGCTTATTACTTGCAGCTGGTGCAACAGCGAATAGTATATATGAATTTTCGGAGTCGCTAAATGAAATGGGGAACTGTTTGCTAACAAAAACCTCTGCAGCCTTTGCTGATGAAAACGGAAACGTGCTAGCAACTTTGGGGAATTTGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTAGTTGTGACAATCACCAACCCAACAGACTCTCTCCTCAGTGAGTTGCTCAAAGTGGAGGAAATGAAACTTCAATGTCATGAGAAAAGAGAAGTCTATGATCACATGATGGCTCAACAAAGAGAGAAGGGAAAACTGAAAAATGGTAAAGTTGAAAGTTCAGTTGCACAAAGACTGAAAGAAGCTCAAGATGAATATGATGAAATGGCTAGATTATGTGTATTTCGGGTGAAATCCCTTAAGGATGGACAATGGCGTAGTCTTTTGACACTAGCTGCTCGCCATCATGCCGCACAGTTGAATTTCTTTCGCAAGGGACTTAAAGCTATTGAAGCAGTTGAACCTTTTATAAGAAATGTTGCCGAAAAGCATCACATCGACTGCCAACTCAGGGGATTGTATGATTGTGGGTCTCAGGAAGGTGAACCTATGAGTGGCCATGAAAGCACTAATGATGGAGAATTGAGTTTTGATTATAAACAAAAGAAACAAGGACTTGATGACGATGGCACCTCACCAAATCCAATGGAGCTGGACCAGGTGGATGTGCCGTATTTTCAAGCTTCAAATTTAGACGATTCAGAGATGAATCAGAATAGACATAAAGGGGAGCAGCTTTTCGGTAGGCAAACTAGAGGTAGCAGCTATTCTGCCCCACTATACCCAGAAAAAAGTAAGGGATCTGAAAAGCATAAGGAAAATCAAACCTCGCCGAAATCTTACTCTTATGTACTACCTCCACCCGTTGTGGATACCCGAAATCCAATTTTAAAACCTGCTACATCTGTTTCTCATTCAACCCCCTTTCAAAATGTGCAACACGATAGCACATCAATGGCTGCTTTGGCCTCGAAACCCAAGTCAACAATAAAAACTGGTAACATTATTACTCCATCCATCCAGTTACCCTCGCCCACCACGTCTACCGGAAGATCTTCATTCTCACAACAGGATAGTTATTACAGAACCAATAGCAGTAAAGTAGACAGAAGACAATCTTACTCTGGCCCGTTACCACCAAGCAAGCAGTTTTCTTTTAAAATTGCATCTAATAGTAGCGGGCCCATTAGTTCTACCGAACTTCCTCATCCGCCTTCTCGGTCCCCTGTTTCTCAGCCCAATTTGTCAGCTAGTCCTTCACCTCCCCCTTTATCTTCTCCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCGCCTCCTAGTAGTCTAGCCTTCTCTAAACCCGTTGCTATTTCGGGTGGATTTAGTCGACATTCAGCACCATTACTTTCAAAAAATCAAGAAATTTCTCCGCCTAATAAACGGGCTATGCTAACATCCTCAACTTGTGCATCACCTCTTCCTCTTCCCCCTTCTGTTGTGAAATTCAGCTCAAGTAACAGCGGGACCTGA | 1728 | 42.07 | MKTSFGKLGRKLTMQKSDMKEMKDHQASAHVDELNQASKDIQNMRSCYDGLLLAAGATANSIYEFSESLNEMGNCLLTKTSAAFADENGNVLATLGNLQLELQKIADTYRSYVVVTITNPTDSLLSELLKVEEMKLQCHEKREVYDHMMAQQREKGKLKNGKVESSVAQRLKEAQDEYDEMARLCVFRVKSLKDGQWRSLLTLAARHHAAQLNFFRKGLKAIEAVEPFIRNVAEKHHIDCQLRGLYDCGSQEGEPMSGHESTNDGELSFDYKQKKQGLDDDGTSPNPMELDQVDVPYFQASNLDDSEMNQNRHKGEQLFGRQTRGSSYSAPLYPEKSKGSEKHKENQTSPKSYSYVLPPPVVDTRNPILKPATSVSHSTPFQNVQHDSTSMAALASKPKSTIKTGNIITPSIQLPSPTTSTGRSSFSQQDSYYRTNSSKVDRRQSYSGPLPPSKQFSFKIASNSSGPISSTELPHPPSRSPVSQPNLSASPSPPPLSSPKISELHELPRPPPSSLAFSKPVAISGGFSRHSAPLLSKNQEISPPNKRAMLTSSTCASPLPLPPSVVKFSSSNSGT | 575 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr08g04017 | 575 | MobiDBLite | consensus disorder prediction | 316 | 359 | - | - | |
| Amtr08g04017 | 575 | MobiDBLite | consensus disorder prediction | 531 | 575 | - | - | |
| Amtr08g04017 | 575 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 569 | IPR037488 | - | |
| Amtr08g04017 | 575 | MobiDBLite | consensus disorder prediction | 402 | 575 | - | - | |
| Amtr08g04017 | 575 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 24 | 243 | IPR027267 | - | |
| Amtr08g04017 | 575 | SUPERFAMILY | BAR-IMD domain-like | 32 | 230 | IPR027267 | - | |
| Amtr08g04017 | 575 | CDD | BAR | 31 | 227 | - | - | |
| Amtr08g04017 | 575 | MobiDBLite | consensus disorder prediction | 402 | 486 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr08g04017 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 13218 | Amtr07g05144 | Amtr08g04017 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr1:198435724 | Amtr08g04017 | Amtr-Chr8:107879251 | dispersed | |
| Amtr | Amtr-Chr8:107879251 | Amtr10g03947 | Amtr-Chr10:91918608 | dispersed | |
| Amtr | Amtr-Chr1:69181835 | Amtr08g04017 | Amtr-Chr8:107879251 | wgd | |
| Amtr | Amtr-Chr7:107875731 | Amtr08g04017 | Amtr-Chr8:107879251 | wgd |