Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr08g04034 | ATGGCGGCAGATAAGCTGAATAAGCGTTCTAAGGTAAACAATGGAATTTGTCGAACATCTTGGGAGATACAAAAAGTGAAAAAGAAAAAACATCCTCATTATGATTTAAATACAAAATCACGTATTTGTCTCGAGTGGGATGACAAGAAGGAATCTGTTGTATCTAAGAAGGAGCAGATAAGTATTGCACAACGAGAGTTGACCCCGTTTCTTCCTTTTGTTGCGCATCACCAAAATGTTATTGGTGATGTCTTTGCAGCTCCTCCTGAATTATTCGAACTCAATAACTTGACCGGTTCGCTATCTTATGAGGTATGGCAAACTCATTTGTCTGATCAAGAAAGAGAGTTTCTTACCCAGTTTCTTCCTGAAGGGGCTGAGCCACATGCAGTTGTTCATGAATTGTTAGCTGGGAACAATATAAATTTTGGAAATCCATTGCAAAAATGGGGTGCTTCTATTTGCTCAGGTGATTATCATCCTGATGCCATTCTCCGTCAAGAACAACATAACAAGGCTAATAAAGTAGCATATTATTCAGAATTGCAGGAATATCATACTAAAATGATAAGGAGTCTCCAATCATGGAAGGAAACATGGACAATAAGCATGAATCCAGAACATTCTATGCAAAAGATACCAAGGCCCAAAAGGGATTTTCATAAAAGTGGGTCGTCACATGAGTTTGACTTACAAAATGGTCCACAACATGATTTGTGTGTAACATCTGGTTCTTGTTCATGGAATGCTGATGATAAATCATGCAATAGCGACAGCCCTGAGGCCCGAGATCTATCAGCTAGCAACGGAGAAACATTAGTGAGTGCTTCTAGGACAGATTTGGGGAACAAATTTTACAATTCACCAGGTGAGAGATCGGTAGCAAGACCTAGAAAAGGAGATAAATTACACAAGCTCAATGTAGAGAGTGTTGATGGTGCCAAATATATGTCATATATCAAGGTTAGCAAGGAGCAGCACGAACGAGTTAAAAGCAGTATGAAACAGTCTAACACCAGCATTCAACCACGGTCTCTTAATCTTGTTTTGGGAAATATTGATGGTTTTCGTGTTCAACCGTATGAACTGTTCGAGGAAGAAGAGAGACAGAAGTTGCATGATCACTGGTTGCATTTGGCAAAGAAAGATCTTCCTGCTGGCTTTGAGAATTGGAAAAGTTGGCGATCTGCCAAGTGGCAATTGACAATGTCTTTGAGGAAAGAAATGGAAGATAAATGGAAGTCAAATGACGGGCCTGTTTTGAATTTGTATAATAATCAGGACGACGAGTTCATAACTGATGGTCAAGATGAAGAGCTAGAGCAATCGAGTGAAGAGCAACATGACGGTGAAGAAACGAATGATGCACTTTTAATCGCATTAGAGGAGAACATGGAACAGAATGATATTTCAGTATTTCGGTCAGAAGCCGATCTTAATGCAGAAAATCATGACGCTACAAAGAACTCTAGTCAAGATTATACAGAAAATCGTGATGTTACAAACAAGTCTAGTCCAGATTATGCCAAAAATCATGATACTACAAACAACTCTAGTCCAGATTATGCCGAAAATCATGATGATACAAACAAGTCTAGTCAAGATTACGCAGAAAATCATGATGCTACAATCAAGTCTAGTCAAGATTACGCAGAAAATCATGATGCTACAAACAAGTCTAGTCAAGATTCCGGTCAACACCAAAACTTCTGTCCCGTGCCCATCAACACCAACAGTGATGCTATAACAGAATCAGATGCTTTTCCTTCTAATCTAGTTGCTTATCCTGAAAGCATAAATCATGCAGCTGCTTCTGTTAGTGAACAGTTTCCTCTGCACTCTGATGCCACTGAAATATGGCCGCTAGCTCCCCTACCGAATGTGTACTACCATCAACCTACATCTGTAAACCAAGATTACCCTTCTGTTAGTCAACCAACTTTTCTCAACAGACGATCTGACAGCGGAGATTCTTTCTTTAATCCTTATGCTAGTCAAGACCGTAACGAGTTACCATTGCATTCACTTTACAAAGATCCTGTGAATTCTAACTATCTGGGAACCAGTCAATTTTCCAGAAATTTAAGTTTGCCATTATTCTCAGATCCAAGACTAAACATTCAACAAAACATATACACAGACGGAGCGGGTCGGTTTCCAATTCCAAGGGAAGAACCCCTGTTGCCACTGGATCAGGTTCAGGGTTGGCCCGGGACTGGCATTGTTAACCTGCCAATGTCAGCGCCGTCCCATCATCGGTTAAGTCAAAACTGGTTTTCTCATGACGAGGTGGCACGCGATGGGTGGTCAGGTAGTGTAGTTCCAAACCATGACATCAGCACTGGTGGTCAGGCGGTTGATGAGAGCTTATATAGCGTGTTATCCGAGTGTAACGGCTTGCGCTCGGGTGTTCATTATGGTTCAACTGAGATTATGCAGTCTGGAAACTTTGTAGAGGTTGGACGTGAATCGGTTATGCCTACAAGCACCAATGGCGTACCATCTCGGGCCGCTAGAGGGCCGGGCCTTAATTACATGAGTGGCAATGAAGCTCAGTTAGGATGGATGAACCTGCCAGGTTCATTGCAGGATAGTGGGGGGAAACCATTTGCAAGGTTATGGAATGATAGAAATTTAAGGTGA | 2643 | 41.39 | MAADKLNKRSKVNNGICRTSWEIQKVKKKKHPHYDLNTKSRICLEWDDKKESVVSKKEQISIAQRELTPFLPFVAHHQNVIGDVFAAPPELFELNNLTGSLSYEVWQTHLSDQEREFLTQFLPEGAEPHAVVHELLAGNNINFGNPLQKWGASICSGDYHPDAILRQEQHNKANKVAYYSELQEYHTKMIRSLQSWKETWTISMNPEHSMQKIPRPKRDFHKSGSSHEFDLQNGPQHDLCVTSGSCSWNADDKSCNSDSPEARDLSASNGETLVSASRTDLGNKFYNSPGERSVARPRKGDKLHKLNVESVDGAKYMSYIKVSKEQHERVKSSMKQSNTSIQPRSLNLVLGNIDGFRVQPYELFEEEERQKLHDHWLHLAKKDLPAGFENWKSWRSAKWQLTMSLRKEMEDKWKSNDGPVLNLYNNQDDEFITDGQDEELEQSSEEQHDGEETNDALLIALEENMEQNDISVFRSEADLNAENHDATKNSSQDYTENRDVTNKSSPDYAKNHDTTNNSSPDYAENHDDTNKSSQDYAENHDATIKSSQDYAENHDATNKSSQDSGQHQNFCPVPINTNSDAITESDAFPSNLVAYPESINHAAASVSEQFPLHSDATEIWPLAPLPNVYYHQPTSVNQDYPSVSQPTFLNRRSDSGDSFFNPYASQDRNELPLHSLYKDPVNSNYLGTSQFSRNLSLPLFSDPRLNIQQNIYTDGAGRFPIPREEPLLPLDQVQGWPGTGIVNLPMSAPSHHRLSQNWFSHDEVARDGWSGSVVPNHDISTGGQAVDESLYSVLSECNGLRSGVHYGSTEIMQSGNFVEVGRESVMPTSTNGVPSRAARGPGLNYMSGNEAQLGWMNLPGSLQDSGGKPFARLWNDRNLR | 880 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr08g04034 | 880 | MobiDBLite | consensus disorder prediction | 479 | 534 | - | - | |
| Amtr08g04034 | 880 | CDD | DEUBAD-NFRKB | 90 | 196 | - | - | |
| Amtr08g04034 | 880 | ProSiteProfiles | DEUBAD (DEUBiquitinase ADaptor) domain profile. | 88 | 199 | IPR044867 | - | |
| Amtr08g04034 | 880 | MobiDBLite | consensus disorder prediction | 211 | 226 | - | - | |
| Amtr08g04034 | 880 | PANTHER | NFRKB-RELATED | 706 | 875 | IPR024867 | GO:0031011(InterPro) | |
| Amtr08g04034 | 880 | MobiDBLite | consensus disorder prediction | 484 | 523 | - | - | |
| Amtr08g04034 | 880 | MobiDBLite | consensus disorder prediction | 551 | 572 | - | - | |
| Amtr08g04034 | 880 | MobiDBLite | consensus disorder prediction | 209 | 234 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr08g04034 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr1:69026643 | Amtr08g04034 | Amtr-Chr8:108141227 | wgd |