AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr10g04122 ATGGAGTGTGCCGCCAAGGGAAGCCAACGGCGGTGCTCAGCCTCTGCTAATCGTCGGTGCCACGGTTGTGGTGTCGTTTTCTATTGCTCCGCCTCTCATCAGATATCACATTGGAACGTTCATAAAGATGAATGCAGAAGACTAAAACGACAAATGGGCTGTGTGCAGCTGCTGAATGATTTCCCTTTTACATTTTCCCGGGAAGCTACTTATCAGGTGTGTGAAAAGGTGGTGACCAGGTGTTCATTCTTGGATAAACTTGGAGTCCACCGTGCAGGAATCTGGATATGTGAATGTAGCTGCGGGTCTTCGGTTTTTTCGTTGGATCATTTGAGGTCTGATAAAGGTTGGAGTCTCTCAAGTAGATTATGCCCTTGTAGAGAGCCTTTGTCTATATTAAAGAAACAGTTATGCAGTTGGAGTGAATATTATGAATGGAGAGGCATCCCTTTAGATTCTCCGGTTGCTCTTCTTCTTCATTGGCCATTGACCGTATACCAAGCCATTCAACTTGCTTTTGCTAAAGAATTGATCCTAGAAACTACAGATGAGCTTTGCATACACTACCTAGGGCCAGAGAGGGAACTATATCAAGCTGCTGTCTTTGGGGAGTTGCATGCTCTTCTCCCTGGGGTCCAAGTGCATATAGATTTTGTGGGGCCTGCAGTTCCGCATGACAGGGACGGTGAGGCACTCAGTCTTTGTAGCTATGCACATTGCATGGAGGCAAACTGCTGTTGTAAAACTCCTAAAAGTGAATCCAGCTCTCGCCCAAATACTGGTAAATCATCAAAGATTACATTACGGTTTCATTCAGGTTATTATCATGACCGTTATAAAGAACTCACCAAGGAATTTCTTCCTGATCTGATCATTGCTCCAAATGCTGGTATTGCTGCTTACAAAAGCTGGTTACCAACTCTTGAACTGATACGTGAAATAGAAATCCCAGCCATTTTTTCTGATTATTGTGAAGAAGCTTGTCATCTTGCAGCCAACTGTATAACCTCTGTGACTGGTTCTCCACCCACAATTCCTGTTCAGCTGAACCCATTTAGGCAGCCTCTGGCTGTTGAAGACAGTGCTCTGCTGCTTCCTTGCTACTCTAATTGTTTTCTGTTTGGAATATAA 1131 44.3 MECAAKGSQRRCSASANRRCHGCGVVFYCSASHQISHWNVHKDECRRLKRQMGCVQLLNDFPFTFSREATYQVCEKVVTRCSFLDKLGVHRAGIWICECSCGSSVFSLDHLRSDKGWSLSSRLCPCREPLSILKKQLCSWSEYYEWRGIPLDSPVALLLHWPLTVYQAIQLAFAKELILETTDELCIHYLGPERELYQAAVFGELHALLPGVQVHIDFVGPAVPHDRDGEALSLCSYAHCMEANCCCKTPKSESSSRPNTGKSSKITLRFHSGYYHDRYKELTKEFLPDLIIAPNAGIAAYKSWLPTLELIREIEIPAIFSDYCEEACHLAANCITSVTGSPPTIPVQLNPFRQPLAVEDSALLLPCYSNCFLFGI 376
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr10g04122 376 SUPERFAMILY HIT-MYND zinc finger-like 11 50 - -
Amtr10g04122 376 Pfam MYND finger 11 45 IPR002893 -
Amtr10g04122 376 ProSiteProfiles Zinc finger MYND-type profile. 1 45 IPR002893 -
Amtr10g04122 376 PANTHER ZINC ION BINDING PROTEIN 4 376 - -
Amtr10g04122 376 Pfam MSS51 C-terminal domain 162 359 IPR046824 -
Amtr10g04122 376 Gene3D - 3 51 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr10g04122 K24081 zinc finger MYND domain-containing protein 15