Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr10g04264 | ATGAAGGAGCAGATAATCACCGAAGATAAATCAGACGGTCTGGATATTGTATCAATCGGAAAGCTGTACGAAGGTCCATTGGAGAAGAAGTATTGGAGTTCGTCTAGGGGTAAAGACAGGCATCCATATCCAGTTGGATATGTAGCTCTTCGGGTGAATAATGGGATTACCTACAAGATGGCGATCCTTGAGGGACTTAAAGGACCTGAATTTGTGATTAGTTCTACGGATGGGCAATCTTGTTCTGGTCAAACTCCAGATATTGCATGGGAGGGCTTACAAAAGAAGAGCAATGTCCGCATAAAATTTCCGAGAGGGAAGAGATTTGCATGCAAGATAGATGGTGCGGAGCTTTTTGGGTTCAAAAATCCACATGTCATGAGGTTACTGCGGGGATTGAAGGCAAATGTCAGCCAAATCCCACCTAAAGATTTGCCATCTTTGCCCTTTGGCAATGGACAGCCTGAAGGAACACATGAACATCATACAAAACATCCTAATTTGCAAGTGAATTTGGTTAAAATCCAGGGTAAAGAGAAAAAAAGTAATAAACGTAAAGAAAATAATGTGAAATCCGTTAGTGGGCCTGGACCTAAAAGAGAGCGACCTCAAGATTTGACACAAAGGGGTCATGAACCACATTGCAGGCGGAGTTTTGAAGGGAATCATAAAAATGAGATTCCTTCAAGTTCGTCAAATTTGAATGAAAATAATGTAGCTCATTTATCGTCAGCAGAAGGGATGCCGGTTGATTCCCTTATTTTACCTGACCATCTTGAGAAGGAGAAATGTCTTTCTGTCCAAGAACCAATCACTCAAGAAGATGCCAGGTTGTTAAAAGGGCAAGAAAATCATGACTTGTCGATGTTTAGCCACACACCAGGGTTCACTTCCTCAAAAACAGTAGATAAAAAGGGAGACCCACCACTTCAAAAAGAATCACAGATGTTGGACGATGGGGACCTCTATGCACCGGATACTCTGGATCTAACATTAGACAGTACATGCAATTTGGAGGTGGAGATCCCCAAAGAAAGTACATGCACGTTAAATGAGAAGTTAAATTCTTCCCAAATTTTGGTTTCTGAAAAATGTGTAACTGACTCTAATTCAAAAGATGAGATGGTTATTGCTTCTGCTTCTGGAAGTGATCATTCTGAAAAGACTGATTCAGATCCAGTTGGACATGAGATATCCAACTCAATGATGGCATTACTACTTCCGCGAGCTCTTCCTTTGCTTAAGACTTTTTCAAGAAAGAAAAAGAAAAATATTGATGGAATGTTCCAGAAGGAAAGAAAGGAGGTTGACCGATACCCCAGAGATGACCCTCCAGCCAAATCTTCTGAGCTTTTGGAAAAGCTCAGCGGTGAAGTTTACATTACAGACAAACCTTCTGCTGGAAACTTTACATCTGAGAAGCAAAATGAAAGTGTTCTCTTCCCAAGTACAAGTACCGATTCAGCTGTACCTGGTTTAGAAGATTCAACAACTGTTGCACCTGATAGTTTTGAGAATGATCTGTGTGAAATTGTGGATTGCTTCCAGGCTGGGCAAGTTCAAGATGCTGTTAAAGCTGATCAAGATACTTCCAGTACAGATTTATGCATCCGTGAAGGGCACCATCAAGAAGTAGAAGTTACAACTGACAATGTGTACTCTATGCTAACTGTTGATCATGTAGCTCAAAAGGGAATAGAAGGTTTCACAGGGGGAGTTGATGCATCAGTTCCACCGCATCAAGAGGCAGATGGTTTGATTTCAATTTTGCCGGGTCAAAGAATAAGTCAACATGACAAGACTAAAATGTTGCACAGTGATGAGGAAGCTAAAGTGGTGCCCAATGACGAACGAGAGAATATATTTGAACTTTTAGGCTGCTATATGCTTCCAACACCAATTTCAATGGCAATGTTGAAAACAAAAGGGGATGAGATATTTGTATGTGTTTTATGTGGCTATTTGATGGAAAACGACAGGACATTGTTCATTTATAAGGCATCAATTAAAGGAGAAACTAGAGGATGCCCTTCTTTTATTGGTCACACAACAATTATCTCACCAACATCAAGGAACGCATCTGGTAGACAAGTTCTTTTGGATAGTTCAAGTTTACAGCTTACTCCAGACGGAAAATCCCTTGTTTTACTGAACAGTATTAAAGCTCCTTACTGCAGGGAGGGGAGTGTAAACTGTGGGTGTTCAGTGTGTACTTCAGATTGCTTCGAGAAGAATGCAGTAAAAATTGTGCAAGTAAAAGTTGGCTATGTTCGAGTAGTATGCAAACTGCAAACAACTAACAATGTGTGCTCCATTTTAGTTTGCGAACCCAATTATCTTGTTGCTTCTGAAGAGAGTGGAAAAATGAACTTATGGACCATGAACTCATCATGGAGTGCACCAACAGACCAGATCTGTTTGCCAATGTCTGACTGCATGCCTAATTGTATAATTGAGATGAAGAGAATACCAAATTTCCAAGCTCTTATTGTTGGTCACAGCGCATTTGGGGATTTTTGCGTGTGGGATTTAACAAGAAGAACCCTTGTGTCCAAGTTTTCAGCTCCAAGAACTTCATTTCTCCCCTTCATCCCAATCAGTTTATTTAGGTATCCTAGTCAAGCTTTATCCACCTTAGATGCTTGTAGGAAGAAACAAGTTGAAGACATCATGGAAGAAACACAAAGGTGGTCTTTAGAAACAGAGAGCCATAATTCTCTTCCAGTAAATGGAGAAGATCTGTCCCTTGTTCTTTTTGTCTCATCTGTCTCAAATTTTGATCTTTTTGATGAATATCCACATAAAGATTTGGAAGTCAGTCCAGCTGGATCCTGGAGCTTAGCATTGCTGGCCAAAAATAAACTAGTTTCAGAAAATGCTTTGGATCCAAGTGCCACTGTAGTTGGTGCATCATCAGGTTATGGAATCGTAGGTACATGTGATGGTTCTCTTTACATTTGGGAATTATCCACAGGTACCAAGCTCGGTTATCTCAGCCATTGTGCAGGAGCCACGGTATCATGTTTTTTTGCTGATGACTCAGACTCTGGCGTTTTTGCGGTAACTGTTGACGGCAACCAGCTGCTGGTATATGCTCCTGGAACATTGGCAAATAAAAAAACATGA | 3126 | 40.66 | MKEQIITEDKSDGLDIVSIGKLYEGPLEKKYWSSSRGKDRHPYPVGYVALRVNNGITYKMAILEGLKGPEFVISSTDGQSCSGQTPDIAWEGLQKKSNVRIKFPRGKRFACKIDGAELFGFKNPHVMRLLRGLKANVSQIPPKDLPSLPFGNGQPEGTHEHHTKHPNLQVNLVKIQGKEKKSNKRKENNVKSVSGPGPKRERPQDLTQRGHEPHCRRSFEGNHKNEIPSSSSNLNENNVAHLSSAEGMPVDSLILPDHLEKEKCLSVQEPITQEDARLLKGQENHDLSMFSHTPGFTSSKTVDKKGDPPLQKESQMLDDGDLYAPDTLDLTLDSTCNLEVEIPKESTCTLNEKLNSSQILVSEKCVTDSNSKDEMVIASASGSDHSEKTDSDPVGHEISNSMMALLLPRALPLLKTFSRKKKKNIDGMFQKERKEVDRYPRDDPPAKSSELLEKLSGEVYITDKPSAGNFTSEKQNESVLFPSTSTDSAVPGLEDSTTVAPDSFENDLCEIVDCFQAGQVQDAVKADQDTSSTDLCIREGHHQEVEVTTDNVYSMLTVDHVAQKGIEGFTGGVDASVPPHQEADGLISILPGQRISQHDKTKMLHSDEEAKVVPNDERENIFELLGCYMLPTPISMAMLKTKGDEIFVCVLCGYLMENDRTLFIYKASIKGETRGCPSFIGHTTIISPTSRNASGRQVLLDSSSLQLTPDGKSLVLLNSIKAPYCREGSVNCGCSVCTSDCFEKNAVKIVQVKVGYVRVVCKLQTTNNVCSILVCEPNYLVASEESGKMNLWTMNSSWSAPTDQICLPMSDCMPNCIIEMKRIPNFQALIVGHSAFGDFCVWDLTRRTLVSKFSAPRTSFLPFIPISLFRYPSQALSTLDACRKKQVEDIMEETQRWSLETESHNSLPVNGEDLSLVLFVSSVSNFDLFDEYPHKDLEVSPAGSWSLALLAKNKLVSENALDPSATVVGASSGYGIVGTCDGSLYIWELSTGTKLGYLSHCAGATVSCFFADDSDSGVFAVTVDGNQLLVYAPGTLANKKT | 1041 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr10g04264 | 1041 | SUPERFAMILY | WD40 repeat-like | 744 | 1032 | IPR036322 | GO:0005515(InterPro) | |
| Amtr10g04264 | 1041 | MobiDBLite | consensus disorder prediction | 202 | 223 | - | - | |
| Amtr10g04264 | 1041 | Gene3D | - | 703 | 1035 | IPR015943 | GO:0005515(InterPro) | |
| Amtr10g04264 | 1041 | ProSiteProfiles | FYR domain FYRN motif profile. | 6 | 65 | IPR003888 | GO:0005634(InterPro) | |
| Amtr10g04264 | 1041 | MobiDBLite | consensus disorder prediction | 291 | 312 | - | - | |
| Amtr10g04264 | 1041 | MobiDBLite | consensus disorder prediction | 428 | 449 | - | - | |
| Amtr10g04264 | 1041 | Pfam | F-Y rich C-terminus | 68 | 134 | IPR003889 | GO:0005634(InterPro) | |
| Amtr10g04264 | 1041 | MobiDBLite | consensus disorder prediction | 144 | 236 | - | - | |
| Amtr10g04264 | 1041 | ProSiteProfiles | FYR domain FYRC motif profile. | 66 | 146 | IPR003889 | GO:0005634(InterPro) | |
| Amtr10g04264 | 1041 | Gene3D | - | 10 | 137 | - | - | |
| Amtr10g04264 | 1041 | MobiDBLite | consensus disorder prediction | 428 | 453 | - | - | |
| Amtr10g04264 | 1041 | PANTHER | TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 | 614 | 1018 | IPR040092 | GO:0005634(PANTHER)|GO:0051726(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr10g04264 | - | - |