AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr10g04265 ATGCCCAAAACCATACAATCTCTACAAGAAAACAAGAAACCATTCCATCGAAGGAATGGTTCGGGCGAGATTCATATATTTGAATCTGCCCGGTACTTTGAAACCAGTACTGACGCCACCCTCGCTCATAAGCATTATACAAGAGAGGGTGGCGGAAGACTGAGTCTTGATATTCCCAACCCTAGACGAAACTCGATTCCTTTACAAGCCATGTTGATGGAGAACCGAAATTCGGTTCCTTTACGAAGCATGATAATGGATCAAAACCCTATCATGGTCAAGAATGATAAGATTAAGCATAAACAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAATTCCCTTTTCAACCAAACATCTTCTAAGAAATCAAAGTCCAAGTCAAAGTCTACTACATCAACACATTCTATGAAAGATGAAGATGAGAGCCCTAGTGGTTGGAGAAGAAGGAGGAGGAGTAGCATTAGCCTTTTCAGGAGTGGAAATAGTAATTCCAACACTAATGTAAGTGACACAAAATCTACTTATTCAAGAACACTACTACAACCACCCATAAAGAGTACACCTTCTAAAGATCTTAGACCCCATTTAGACAACAAGCCTGCATGTGAAATTACAAGAATACCCATCAATGAAAACCACAACAAGAATGAAAGTATCATGATCAAAAGTGTGTTTACTGAGCAAAAAAGAAGTTGTGGAAATGAGATATTGGAGAAAGTTAAGGTTTGTGATATAAAACATGATGATAATGATAATAATAATAATAATAATATTAAGCATGATCCAAAGGTGGAGATCAAAGAACTAAAAAGTTTCATCCTTGATGATGATAATGATGGTGGAGATAGTGATTCAAGTTCTGATCTTTTTGAGTTAACAAACTGTGATTTGGGTTATTATTCAAGTGGTTTGCCAGTTTTTGAAACAACCCATATGGATAGCATCAAGAGGGGTGCACCAATCTCTAGCTAA 981 37.41 MPKTIQSLQENKKPFHRRNGSGEIHIFESARYFETSTDATLAHKHYTREGGGRLSLDIPNPRRNSIPLQAMLMENRNSVPLRSMIMDQNPIMVKNDKIKHKQPSSPGGKLAHFLNSLFNQTSSKKSKSKSKSTTSTHSMKDEDESPSGWRRRRRSSISLFRSGNSNSNTNVSDTKSTYSRTLLQPPIKSTPSKDLRPHLDNKPACEITRIPINENHNKNESIMIKSVFTEQKRSCGNEILEKVKVCDIKHDDNDNNNNNNIKHDPKVEIKELKSFILDDDNDGGDSDSSSDLFELTNCDLGYYSSGLPVFETTHMDSIKRGAPISS 326
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr10g04265 326 MobiDBLite consensus disorder prediction 1 21 - -
Amtr10g04265 326 MobiDBLite consensus disorder prediction 119 133 - -
Amtr10g04265 326 MobiDBLite consensus disorder prediction 119 200 - -
Amtr10g04265 326 MobiDBLite consensus disorder prediction 158 188 - -
Amtr10g04265 326 MobiDBLite consensus disorder prediction 134 151 - -
Amtr10g04265 326 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 88 319 IPR039621 GO:0009734(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr10g04265 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
13327 Amtr09g02822 Amtr10g04265
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr10:99105900 Amtr02g01389 Amtr-Chr2:34187680 wgd
Amtr Amtr-Chr10:99105900 Amtr09g02822 Amtr-Chr9:74434295 wgd