Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr12g00211	ATGGGAAAATGTGAACTAGCTGGAGTTGTTCTCGCCATTGGTGTTGCAAATCTCACATGTGTGTCAATCATGAAAGGACTATGTATGGGAATGGATCCCATTTGTTTTCAAGCCTATGGAGCCAAGCGCTTCGCAATCCTTAGCCAAACATACATCAAAACCTTCATCTTACTCTTGTTCACTTCCATTCCCATCACATTTCTATGGCTAAATATCGAGCCTGTTTTACATGGGCTTGGTCAAGACCGCGCTATCACAAAGGTTGCAGCCACATACTTACTCTTTTCTCTACCAGAACTCCCAGCCCTGGCTCACCTTTTACCGTTGCGTTCTTTCTTGAGGACACAAGGATTAAACTCACCAACAACCATTGTTGCCACTTGTGCCACAATCCTACATCTCCCTGTTAACTACTTTCTTATTAGTTATTTGAAACTCGGAACAAAGGGCATTGCATTGGCGTCAACATTGTTTACATATAACATGAATGTTGGGTTAGTACTCTATGTTTATATGTCAAATATTGTCATCAAGCCTTCATTATCCAAGACCAACATGGCATCAGTTTTCAAAGGTTGGGGGCCATTGTTGAGCTTATCGATCCCTAGTGTGTGTTCAGTTTGTTTGGAGTGGTGGTTGTATGAAATCATCCTTTTCCTTAGCGGATTGTTAGCTAATCCTCAATCGTGTGTGGCTGCGACAGGAATCATAATGCAACTAACTGGCATAGTCTATGTGATGCCGTTCTCATTGAGTTTAAGCATATCACAACGTGTAGGACATGAATTAGGAGGAGGGCAACCAACTAGTGCACAATGGGCGGCAGCGATTGGGATATCAACTGCGTTTATGTATGGGCTTGTAATTTTTGCCCTATATGTTACTTTAAGAAATGTTCTTGGAATGTTGTACACTAATGAACCCGAAATCCTGGCCATGCTTTCTTCCGCTCTACCGGTCATTGGGCTCGCTGAAGTCGCAAACGCCCTACAAACAGCCGGTTGTGGTGTTTTGACTGGTTCGGCCAGACCAAAAGTGGGTGTTAAGATAAACATTGCTGCTTTCTACCTTGTAGGGCTTCCTATGTCAATCGGGTTAGCTTTCTTGTTCAAGTTCGGTTACCAAGGGTTATGGCTTGGGATGGTTGCGTCACAGGCTGTTTGTGCAGTGTTGATGGTGTGTACATTGATCAAAACAGATTGGAGCCATCAAGCTAAGAGAGCTGAGGAGCTAACTTTGACTGTGAATAAAGATGATATGGAGTCAGCAGAACTTGTCCCTTGA	1284	43.38	MGKCELAGVVLAIGVANLTCVSIMKGLCMGMDPICFQAYGAKRFAILSQTYIKTFILLLFTSIPITFLWLNIEPVLHGLGQDRAITKVAATYLLFSLPELPALAHLLPLRSFLRTQGLNSPTTIVATCATILHLPVNYFLISYLKLGTKGIALASTLFTYNMNVGLVLYVYMSNIVIKPSLSKTNMASVFKGWGPLLSLSIPSVCSVCLEWWLYEIILFLSGLLANPQSCVAATGIIMQLTGIVYVMPFSLSLSISQRVGHELGGGQPTSAQWAAAIGISTAFMYGLVIFALYVTLRNVLGMLYTNEPEILAMLSSALPVIGLAEVANALQTAGCGVLTGSARPKVGVKINIAAFYLVGLPMSIGLAFLFKFGYQGLWLGMVASQAVCAVLMVCTLIKTDWSHQAKRAEELTLTVNKDDMESAELVP	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr12g00211	427	Pfam	MatE	2	139	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)
	Amtr12g00211	427	Pfam	MatE	202	363	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)
	Amtr12g00211	427	PANTHER	MULTIDRUG RESISTANCE PROTEIN	2	404	-	GO:0016020(PANTHER)\|GO:0022857(PANTHER)
	Amtr12g00211	427	CDD	MATE-eukaryotic	2	407	IPR045069	GO:0042910(InterPro)\|GO:1990961(InterPro)
	Amtr12g00211	427	NCBIfam	MATE family efflux transporter	2	378	IPR002528	GO:0015297(InterPro)\|GO:0016020(InterPro)\|GO:0042910(InterPro)\|GO:0055085(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr12g00211	K03327	MATE family, multidrug and toxin extrusion protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	243737	Amtr	Amtr11g01265	Amtr-Chr11:30239326	Amtr12g00211	Amtr-Chr12:6625477
	271181	Amtr	Amtr12g00211	Amtr-Chr12:6625477	Amtr02g05103	Amtr-Chr2:94476763