AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00254 ATGAGCTTAACCACCACCACTACTAATGAGGATTTTGACAGCAGCAACACTTTAGATCTATTCTCTCGTAATCGTCGTACTCTCTCTGTCACCTCTTTCGATGAATCCGACTTTCAGTTGAGATTGGAAAAGCTTTCAGATGGAACAACAAAACCTGAAAAAAGTGTGTTAGATGATCTGCTTTCATCTAATGAAGGGGGAAAGCATGACTATGACTGGCTCTTGACTCCACCAGAAACATCTCCACTTACTTTTACAAATGGAAAAGAATCTCAACCAAAATCAGTTGCCCCAAGAAGAAATTCTTCAGTTAGATCAGGCTCTACAAACAGAACATCAAGGCTTTCTGTTTCTCTATCTGAGAGTAACCATCTTTCAAGACCAGCAAGAAGCAGTTCAGTGACTCGCTCAACGATCTCTACTACCCAAAACACAAACACAAACAGAAACTCTAATATTTTGAACACTAGCTCTGCTTCTGTCTCTTCTTACATAAGACCGTCCACCCCAACTAACCGTTCACCATCAGCCGCTAGACCCTCCACCCGAACAACACCCTCCAGAAGCCGCCCATCATCCACTTCCAATGATAGAATCACTAGACCATCAACTCCTACTCCGCGTCCCCAGTCACCTACAGTTCGGCCAGCTTCTAGGCCATCAACTCCAACGCGTAGGAATCCAACATCTTCTAACAACCGGAGTGTGGGACCTACATCCAGGCCAAACTCTCCTATCTCGAGGGTCCGGGCCTCCCCTCAGCCCATCAATAACCCTGACTTTCCAAATGAAACGCCACCAAACCTCAGAACTAGTTTCCCACAAAGGCCTGTGTCTGCTGGTAGGTCCAGGCCAGGTGCAGCCTTGACAGTGAAGGGAAATATAGAGAATACAAACACAAGGAGGCCGTCGTCGCCAATTGTTGCTAGGGGAAGAGTTGCAGACCCATCCGGATGGGGGCGGTTGCATGCTAACGGGCATGCGGTTGAATCAACTACAAGAAAACCTATAAAGGTGTTGAATTCTGATAATGGTACAGGGTTTGGGAGGAGTATCTCAAAGAAATCACTTGACATGGCTATAAGACAGATGGATATAAGAGCAGGAGGTGCGCGCCCACTTTCTGGGTCAACACTCTTTCCTCACAGCATTCGATCTAATCATGGTTCAAGTGCCAGCAACAATGTAAACTCAAAAAATGCAACTTTTAATATCGGTTATTCAGATAACAGAGTGAAACCCATGAGCATAGAAAATAAAAGCCCGTATTCTTCTAAACTAACACATGTAGACATATACGAGAGCTTGAGGTACGATGCGATTTTACTAAAAGAGGACTTGAAGAACACGAGTTGGCTGCACAGTGCAGATGAAAAGAGCGATCAAAGTCCGTTGTTTGATAATGGATTTGAGTCACTCCCTGAACCTTTTGCCCCTATGTGA 1443 45.05 MSLTTTTTNEDFDSSNTLDLFSRNRRTLSVTSFDESDFQLRLEKLSDGTTKPEKSVLDDLLSSNEGGKHDYDWLLTPPETSPLTFTNGKESQPKSVAPRRNSSVRSGSTNRTSRLSVSLSESNHLSRPARSSSVTRSTISTTQNTNTNRNSNILNTSSASVSSYIRPSTPTNRSPSAARPSTRTTPSRSRPSSTSNDRITRPSTPTPRPQSPTVRPASRPSTPTRRNPTSSNNRSVGPTSRPNSPISRVRASPQPINNPDFPNETPPNLRTSFPQRPVSAGRSRPGAALTVKGNIENTNTRRPSSPIVARGRVADPSGWGRLHANGHAVESTTRKPIKVLNSDNGTGFGRSISKKSLDMAIRQMDIRAGGARPLSGSTLFPHSIRSNHGSSASNNVNSKNATFNIGYSDNRVKPMSIENKSPYSSKLTHVDIYESLRYDAILLKEDLKNTSWLHSADEKSDQSPLFDNGFESLPEPFAPM 480
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00254 480 MobiDBLite consensus disorder prediction 79 204 - -
Amtr12g00254 480 MobiDBLite consensus disorder prediction 71 287 - -
Amtr12g00254 480 MobiDBLite consensus disorder prediction 217 278 - -
Amtr12g00254 480 MobiDBLite consensus disorder prediction 457 480 - -
Amtr12g00254 480 PANTHER GASTRIC MUCIN-LIKE PROTEIN 6 463 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00254 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
12902 Amtr06g01651 Amtr12g00254
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
296923 Amtr Amtr12g00254 Amtr-Chr12:7877646 Amtr06g01651 Amtr-Chr6:33553323