AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00267 ATGCATATGAGGGTTCAATTTGGAGGTATAAGGAAGTTTGTCGTGGTTATGTGCTTATTCTGGTGGCCACTTGTTGAATCTCAAGTAACTAATCCTCTACCAAAGCCTGCAAGGGATCTTGATGTGACGCTACAGGACTATGCGTATCGCGCGTTTGTTAATCCGCGGACTGGTATTCCGTTTGACGGTGTTGTGCCGCCTTATTTGAATGGAATTGAGATATCAGCAATGAGGCTCAGGAGTGGTAGTTTGTATCGTAGAGGCGTTCGGATGTTTAAGGAGTTTGTGATTCCGGTTGGTTTACGAGAGCAACCATATGTTGAGAGGCTGATTTTGGTGTATCAGAATTTAGGGAATTGGTCTACAACTTATTACTCTTTACCTGGTTACATTTATCTAGCTCCTGTATTGGGTCTTCTTGCTTATAATGGTACAGATTTGTCAGCTACTAATCTACCTGAACTTGATTTTTGGGCGTCTGAGGAACCGATTACTGTGAATTTTGGAAGGATAAAGTCGATACCATTTGGTTCGGTTGTAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAACTTGACACATATGTTACCTGGCAATGTATGTTTGACTACGGAACAGGGGCATTTCTCCATTGTAGCTGAATTAGGTGTTTCTCCTAGTCAAGTACCCCCTGCACCACCCGAACCTGCACCGCGTGGACATAGACATGGTAATAGAAAGAACGTCGAGGCTAGGGTTTGGGGTATTATTGGTGCAGCGACAGGTGGAACTGCATTGTTGGTGTTATTCACATTGTTGATATTGTGGGTGTGGCGGTATAAAAAGAGAAAACGACTGCGTGAATTGGAAAGGGCTGCAGATGCTGGTGAAGCATTGAGGATGACTAGAATTGGGAACATGAGAGCACCATTTGCATTGGCTACAAGAACAATGCCGAATTTTTTAAGCGATTTTGATGCTTGA 966 43.48 MHMRVQFGGIRKFVVVMCLFWWPLVESQVTNPLPKPARDLDVTLQDYAYRAFVNPRTGIPFDGVVPPYLNGIEISAMRLRSGSLYRRGVRMFKEFVIPVGLREQPYVERLILVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGTDLSATNLPELDFWASEEPITVNFGRIKSIPFGSVVKCAWFDLHGQVNLTHMLPGNVCLTTEQGHFSIVAELGVSPSQVPPAPPEPAPRGHRHGNRKNVEARVWGIIGAATGGTALLVLFTLLILWVWRYKKRKRLRELERAADAGEALRMTRIGNMRAPFALATRTMPNFLSDFDA 321
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00267 321 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 15 315 IPR010605 GO:0016020(PANTHER)
Amtr12g00267 321 Pfam Protein of unknown function (DUF1191) 36 214 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00267 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
12903 Amtr06g01658 Amtr12g00267
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
243428 Amtr Amtr11g00850 Amtr-Chr11:22242530 Amtr12g00267 Amtr-Chr12:8039526
244240 Amtr Amtr11g01959 Amtr-Chr11:43167723 Amtr12g00267 Amtr-Chr12:8039526
296380 Amtr Amtr12g00267 Amtr-Chr12:8039526 Amtr03g07126 Amtr-Chr3:165011892
296924 Amtr Amtr12g00267 Amtr-Chr12:8039526 Amtr06g01658 Amtr-Chr6:33683915
297237 Amtr Amtr12g00267 Amtr-Chr12:8039526 Amtr07g04629 Amtr-Chr7:98414630
297656 Amtr Amtr12g00267 Amtr-Chr12:8039526 Amtr08g05539 Amtr-Chr8:134011157