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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00296 ATGGAGGCCACTAAACACATCACTTCCATCTTCTACTTGCTTCTTTTCATATGCATATTAACTTCAAGTACTACCATAGAAGCTGAAAACACTATTGAAAATGTAATATCGGGACCACCAGGGTTGATTCCAATGGGAATGGGGAGGAGAGAATATAGGATGATGATGGAAATGGACGGCGTCGGGCCACGAAGGAAGCTTGGTCCGTTTCAGGTATGTTTGGTATGCAGGTGTTGTGTGGTGGCATCTGATCCAACCACCTGCTCAAACATGCCATGCTGTTTTGGCATAGACTGTCAGCTTCCAAACAAACCGTTTGGCGTATGCGCTTTCGTCCCCAAGACCTGCAATTGTACCACTTGTGCTTCTTAA 372 45.43 MEATKHITSIFYLLLFICILTSSTTIEAENTIENVISGPPGLIPMGMGRREYRMMMEMDGVGPRRKLGPFQVCLVCRCCVVASDPTTCSNMPCCFGIDCQLPNKPFGVCAFVPKTCNCTTCAS 123
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00296 123 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 122 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00296 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
219269 Amtr Amtr05g06261 Amtr-Chr5:135497949 Amtr12g00296 Amtr-Chr12:8989737