Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr12g00298	ATGGCATTGAAGAATAAAGTGCAAAATATTGTGGTGTATGGGTGGAGAAAGAGTGCATTTATGGTATCTTTATCGAGGTGTATAAGTACGTTTGCAACCGGTTGTGATAACCGGATATTGAAGTCGCCTTCTCTTGTTTCTCTTGACTTCCCTGATGTATGGAATTCCAGCTCTACGAATTATAGTGAACCAGTCATGCACAAACTCGCTAGTGAACATACTGCTAAAATAATCGACGGAAAACAAGTAGCCGAGGAAATTATATCAAAGGTAGCCAATGAAGTGACAAGAATGAAGAAAACAATTGGTGAGGTTCCAGGACTGGGTGTAATTTTAGTAGGCGAGAGAAAAGATTCCCTAATATACGTTCAAAATAAGATAAAAGCATGCGAAGAAGCTGGTATCAAGTTTAAACTGACTGAATTTTCAGATAGTTGTACCGACGATGACGTTTGTGATGCCATAATGCAATTTAATGTAGATCCATCTTTTCATGGTATACTTGTCCAGCTCCCTCTTCCTCGGCATCTAAATGAAGAGAAGATTCTGAATGTTGTGAAATTGGATAAAGACGTAGATGGTTTTCATCCCATGAATATGGGAAACCTAGCCATGAGGGGAAGGGAACCGTTGTTTATCCCCTGCACTCCAAAAGGCTGTGTTGAGTTATTAATCAGATATGGTGTGGATATTATGGGTAAGAAAGCGGTTGTTATTGGAAGAAGCAACATTGTTGGTTTACCCGCATCCTTGCTGTTACAGAAACACCATGCAACAGTTACCATTGTGACTGCATTAACATCAAACCCTGAAGAAATCACACGTGAGGCTGATATTTTGATAAGTGGCGTAGGAGTCCCTAATATGGTTCGTGGAAGCTGGGTGAAGCCTGGCGCTGTGGTGGTTGATGTTGGAACTTATCCAATTGAGGACAAGAGTTGTGAGCAAGGGTATCGGCTGATAGGAGATGTGTGCTATGAGGAAGCATCAAGGGTAGCTTCTTTGATTACCCCTGTTCCTGGAGGAGTGGGGCCCATGACGGTTGCAATGCTGCTGTACAACACTCTTGAATCCGCTGCCCTGGATTTGTGGGCACCTGAGCTTACAAAAATAAGAGACTTGGTTGGGCTGTCGGTTGCAAAAGAATTGAGCTAG	1155	42.42	MALKNKVQNIVVYGWRKSAFMVSLSRCISTFATGCDNRILKSPSLVSLDFPDVWNSSSTNYSEPVMHKLASEHTAKIIDGKQVAEEIISKVANEVTRMKKTIGEVPGLGVILVGERKDSLIYVQNKIKACEEAGIKFKLTEFSDSCTDDDVCDAIMQFNVDPSFHGILVQLPLPRHLNEEKILNVVKLDKDVDGFHPMNMGNLAMRGREPLFIPCTPKGCVELLIRYGVDIMGKKAVVIGRSNIVGLPASLLLQKHHATVTIVTALTSNPEEITREADILISGVGVPNMVRGSWVKPGAVVVDVGTYPIEDKSCEQGYRLIGDVCYEEASRVASLITPVPGGVGPMTVAMLLYNTLESAALDLWAPELTKIRDLVGLSVAKELS	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr12g00298	384	Gene3D	Leucine Dehydrogenase, chain A, domain 1	80	357	-	-
	Amtr12g00298	384	SUPERFAMILY	Aminoacid dehydrogenase-like, N-terminal domain	75	194	IPR046346	-
	Amtr12g00298	384	FunFam	Bifunctional protein FolD	212	339	-	-
	Amtr12g00298	384	Pfam	Tetrahydrofolate dehydrogenase-cyclohydrolase, NAD(P)-binding domain	196	360	IPR020631	GO:0004488(InterPro)
	Amtr12g00298	384	Gene3D	-	78	339	-	-
	Amtr12g00298	384	CDD	NAD-bind-m-THF-DH-Cyclohyd	189	359	IPR020631	GO:0004488(InterPro)
	Amtr12g00298	384	ProSitePatterns	Tetrahydrofolate dehydrogenase-cyclohydrolase signature 2.	340	348	IPR020867	GO:0003824(InterPro)
	Amtr12g00298	384	Pfam	Tetrahydrofolate dehydrogenase-cyclohydrolase, catalytic domain	78	193	IPR020630	GO:0004488(InterPro)
	Amtr12g00298	384	Hamap	Bifunctional protein FolD [folD].	75	363	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	147	174	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	106	128	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	229	249	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	336	354	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	182	203	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	278	307	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PRINTS	Tetrahydrofolate dehydrogenase-cyclohydrolase family signature	319	335	IPR000672	GO:0004488(InterPro)
	Amtr12g00298	384	PANTHER	C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED	74	360	-	GO:0004477(PANTHER)\|GO:0004488(PANTHER)\|GO:0005829(PANTHER)\|GO:0035999(PANTHER)
	Amtr12g00298	384	FunFam	C-1-tetrahydrofolate synthase, cytoplasmic, putative	80	220	-	-
	Amtr12g00298	384	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	195	359	IPR036291	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr12g00298	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	197255	Amtr	Amtr02g03892	Amtr-Chr2:78380691	Amtr12g00298	Amtr-Chr12:9011041
	208583	Amtr	Amtr04g00271	Amtr-Chr4:4462795	Amtr12g00298	Amtr-Chr12:9011041
	220887	Amtr	Amtr06g01736	Amtr-Chr6:34837679	Amtr12g00298	Amtr-Chr12:9011041